KEGG   Hemiscyllium ocellatum (epaulette shark): 132816778
Entry
132816778         CDS       T09720                                 
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
  KO
K16474  intraflagellar transport protein 88
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:hoc03037]
    132816778 (ift88)
Cilium and associated proteins [BR:hoc03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   132816778 (ift88)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_8 TPR_12 TPR_19 TPR_6 TPR_7 TPR_16 TPR_14 TPR_11 ANAPC3 TPR_17 TPR_9 SNAP ARM_TT21_5th TPR_10 TPR_CcmH_CycH ARM_TT21_4th TPR-S TPR_MalT RPN7 ARM_TT21 DUF2225 ARM_TT21_2nd TPR_15 ARM_TT21_N Consortin_N HAT_PRP39_C DUF6584 Coatomer_E HEAT_Nup120 RNPP_C ARM_TT21_C FumaraseC_C
Other DBs
NCBI-GeneID: 132816778
NCBI-ProteinID: XP_060682695
LinkDB
Position
6:81432533..81554644
AA seq 824 aa
MEHVHLTALEEEDLYSGYNDYNPTYDTEELENDVAFQQALRTSHGRRPPMTAKIPSTGAG
VRSFGNMGARVPLASSMGRPATGVIQDGITVARPMTAVRAAGYSSAAYRGSTFDPLGQSR
GPAPPLETKNEDTPEEKVKNLEKIVNELIEESCIANRCGDLQLALEKAKEAGRKERILVR
QREQTASSDHINLDLTYSVLFNLASQYAVNDMYAEALNTYQVIVKNKMFNNAGRLKVNMA
NIYFKQRNYPKAIKFYRMALDQISSSHKEMRIKIMQNIGVVFVKMGQYSDAITSFEHIMS
ESPNLKTSFNLILCYFAIGDREKMKKAFQKLIVVPLGIDEDDKYIPPNDDPHMNLVIEAI
KNDPLRQMERERKAMAERFIMTAAKLIAPAIEASFASGFDWCVEMVKASQYVELANDLEI
NKAITYLRQRDFNQAVETLKMFEKKDSRVKSAAATNLSFLYFLENDFGLADRYADLAMSA
DRYNPAALTNKGNCVFVRGDYEKAAEFYKEALRNDSSFTEALYNLGLTYKKLNRLEEALD
CFLKLHAIMRNSAQVMYQIANLYEILEDLTQAIEWLMQLISVAPTDPQALAKLGDLYDNE
GDKSQAFQYYYESFRYFPSNIEGIEWLGAYYIDTQFCEKAIQYFERAALIQPTQVKWQLM
VASCYRRSGNYQKALETYKDIHQKFPENAECLRFLVRLCTDMGLKEVQEYATRLKKVEKM
KELREQRVRSGRDSSARGRREGSASSENGQSSYVTSAKGERMSAKLKSLPGVNDPYEASN
NKDIDASYVDPLGPQIERPRTAARRRVEEDEFADEELGDDLLPE
NT seq 2475 nt   +upstreamnt  +downstreamnt
atggagcatgtgcatttgacagcactagaagaggaggacctatactcaggatataatgac
tacaacccaacttatgatacagaggaactagagaatgatgttgcttttcaacaagctttg
aggactagccatggaagaagaccaccaatgactgcaaaaataccaagtactggagcaggt
gtacgttcctttgggaatatgggggcaagagtgcctttggcctcttcaatgggaaggcct
gccactggagttattcaggatggaattactgttgctagacctatgacagcagtacgtgca
gctggctattcttctgcagcttacagaggctctacgtttgatccacttgggcaatcaaga
ggtcctgctccacctcttgaaacaaagaatgaagatacgccagaagaaaaagttaagaat
ttagagaagattgtaaatgaattgattgaagaaagttgcattgccaatagatgtggtgac
ctacagttggctttggaaaaagcaaaggaagcaggtagaaaggagagaatactggtgaga
caaagagagcaaacagcatcttcagatcatatcaatctggatcttacttattcggtactt
ttcaatttagccagtcaatatgcagtcaatgatatgtatgcagaagcattaaatacctat
caagtgatagtgaaaaacaaaatgttcaacaatgcgggtcgattgaaggtaaacatggca
aatatttacttcaagcaaagaaattatcccaaggcaataaaattttatcgaatggcattg
gatcagatatcaagttctcataaagagatgagaattaaaataatgcagaacattggcgtt
gtatttgtcaaaatgggacagtactctgatgctatcacctcctttgagcatatcatgagt
gaaagcccaaatttaaaaaccagctttaatctcattctatgctactttgccattggtgat
cgtgaaaagatgaagaaagcattccagaaacttattgtggtcccacttggtattgatgaa
gatgacaaatatatcccacctaatgatgatccacatatgaatcttgtgattgaagccatc
aagaatgatccactcagacaaatggagcgagagcggaaagcaatggcagagagatttata
atgacagcagcaaagttgatagcaccagcaattgaagcatcttttgcatctggatttgac
tggtgtgtggagatggtgaaggcgtctcaatatgttgaactagctaatgacctggaaata
aacaaagctattacttacctgcgacaaagggattttaaccaggctgtagaaaccctgaaa
atgtttgagaagaaggatagcagggttaagagcgcagctgcaacaaatctctctttcctt
tattttttggaaaatgattttggacttgcagaccggtatgctgaccttgctatgagtgct
gatcgatataatccagcagcattgacaaataaaggaaactgtgtctttgttcgaggcgac
tatgaaaaagcagctgaattttataaggaagctttgaggaatgattcttcttttactgag
gcactctataacttgggtcttacttacaagaagttgaatagactggaggaagctttggat
tgtttcttgaagctccatgcaatcatgaggaacagtgctcaagttatgtaccagattgca
aacctatatgaaatactggaagatctgactcaagctattgagtggctcatgcagttgatt
agtgttgcacccactgacccacaggcattggctaaactaggagacctgtatgacaatgaa
ggagacaagtcccaggctttccaatattattatgagtcgtttaggtattttccatcaaac
attgagggcattgaatggcttggagcatactacattgacacacagttctgtgaaaaagcg
attcagtactttgaaagggcagcacttatccaacctactcaagtcaaatggcagttaatg
gtggctagctgttataggagaagtggtaactatcaaaaggcattggaaacatataaagac
attcatcagaaatttcctgaaaatgctgaatgtttgcgctttctagttcgcctttgtacc
gatatgggactaaaagaagttcaggaatatgccacaagactaaagaaagttgaaaagatg
aaagagttaagagaacagcgtgtgaggtctggcagagatagcagtgcacgtggacgcaga
gaaggcagcgctagtagcgaaaatggtcaaagtagctatgttaccagtgctaaaggagaa
cggatgagtgcaaagttgaagtcattgcctggtgttaatgatccttatgaagcaagcaac
aacaaagatatagatgcttcatatgtggatccacttggaccacaaatagaacgacccaga
actgcagctcgtagacgggttgaagaagatgaatttgcagatgaagaacttggagatgat
ttgttaccagagtaa

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