Hemiscyllium ocellatum (epaulette shark): 132817045
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Entry
132817045 CDS
T09720
Symbol
mbd6
Name
(RefSeq) methyl-CpG-binding domain protein 5 isoform X1
KO
K23219
methyl-CpG-binding domain protein 5
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132817045 (mbd6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hoc03036
]
132817045 (mbd6)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
132817045 (mbd6)
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
132817045 (mbd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
Motif
Other DBs
NCBI-GeneID:
132817045
NCBI-ProteinID:
XP_060683079
LinkDB
All DBs
Position
7:complement(27738067..27972491)
Genome browser
AA seq
1686 aa
AA seq
DB search
MNGGNENDGEKDGGGPAVQVPIGWQRQVDQNGVLYMSPSGSVLACIEQVKTYLLTDGTCK
CGLECPLILSKVFTFDPGATVKQRTAEDVKADEDLTKLCIHKRKIIAVATLHKSIEAPHP
SLLLTSPGGGTSGTPMVQSRATTPRAMRNKSQEAMVNSTVPDYKNTFLPKLMTGGPNAVT
RLYQQELCGSPQQELHGYSRQRLGSSDQGQKSPYRGNHGGLSSPASSGSQIYGDGSISPR
TDTVGSPDVFTRNNPGFHAGPNSSPVHINRIPHSPPTVLMQNSSSHPSCAMAGRTSIPLS
PTMTTKSPVMKTPSCNYSSNVDMPRIMFHKPPQGASTSCALQKKPLPSEKDPLGILDPIP
SKPNPVLMSTSNFPTTMHSQVPMMNVNMPPAVVPLPSNLPLPTVKPGPVNHGTHVPRVQH
STSTSVSPAPVASPVHMMGPVMGRIEASPQRSRSSSTSSDHGSLMMPPAGPQSSCSGIKV
PPRSPRSSMGSPRPSMPSSPSTKPEGLFHQYKDIPNPLLVGMNNVLNPQSNPLFPSVSVG
NVPQQKGQPGLLGMPLNQILNQHNAASFPASSLLSAAAKAQLANQNKLSGSNSGGGVGSG
GNSEGHSTLNTMFPPAANMLLPINEGQSGRAALRDKLMAQQKDPLRKRKQGTPTVLSMLK
QSQMGSSGVPKSVIDSVRKQGQNSSLTMNNTMSQLLQSMSSQSSQISGNSSTSCGSSTTG
ISGSSNQHSFSNTSLNSGSIHNLSAQNLTRGEGISCQNTSTNLIHNCQGPNNQFVGLVGQ
LHGNGNCGLLHQSAMTLGNNLHSNHHSRIAASSAAMVPNSSGICSQTSADTGGQDGPSHG
HLHRRQRCSLVNLSGGSSGQPASMAIAGTNQLAITKTTSVLQDGVIVTTAAGNAMHSQIP
VGSTLPFIGQDQAFQFGQAVPTSSNLTHPLNPNLLGSLSIPLAMSQQQLLNQNMLNMLPT
SGDGKGEVSVNPLGILNPTLNSALTLLPGDMAGQTLQPVQLLATLFQNQAQATMLPLTSF
NLTLPDLLQQQNHPSPSVTQIQPLPDHLHSNQLVSNRTETLLTNPLTSPPNNDTTSNPLL
LPAVTAAPGLMALNPHLLRSVLHSPSDRAANHSEVSIATSTQATTTTTTSSSVAALAVST
LGGTAVMSMAESLLPISAAGHSTGPTKLNNSLLPHLPLLGASLLGDVPSFNNNLNNPQLS
RLQTLMNSNQMFPQNHQLLQGLQGTRGLQGFQGPPSFSGPSNPQNPMACVFQNFQQVSPA
QDVSLSNAPVNSHPGTILLSEGSQTALPPFHDLSGDQHQMGQVQGQQGREEAPSVGPHDP
SVDAIYKAVVDAASKGMQVVITTAMSSTSQMSPIPALSAMSAFTASIANPVNLSNAVNAV
IHGKRLSSMEIDNRLHSQNILASRHARGVKLRKSTEQAKITPEGEGFEYFKSPGRNTPKK
QWETEQLAAGDTTVWKCEKFLEHSGQVNHSPSVDRIPSFHGEQTDGVLQQKNCHLDKRFV
EDGFKFNSQKRHIVNIKERLENTLERCTHINGNRSQQNRNFSELLTAPKQELAIEEQSPS
SSASLEGMPGSLAHDYIQYNGDYSSENINGCAPSPSDTKSISSDDDLKIPDSPSNELIHY
RPRTFNVGDLVWSQIKGFPSWPGKLVREDEVHNSCQQNSEEGKVHQTPQKDRQVKSPKAK
RRKISR
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaggaaatgagaatgatggtgaaaaggatggcggggggccagcagtccaagtt
ccgataggatggcagcggcaagttgaccagaatggagtgctgtacatgagccctagtggc
tcagtgttggcctgcattgagcaagtcaaaacatatcttctcaccgatggaacatgcaag
tgtggcttggagtgtcctctcattctttcaaaggtgtttacttttgatcctggagcaact
gtaaagcaaagaacagcagaagatgtcaaagctgatgaagatttgacaaaactttgtatt
cataaacggaagataattgcagtagctacactacataaaagtattgaggcaccacatcct
tccctgcttctaaccagcccagggggtggaacaagtggaactccgatggtacagtcacgg
gcgacaacaccaagagcaatgaggaataaatcacaagaagcaatggtaaattctacagtg
ccagactacaagaatacgtttctgcctaaattgatgacaggaggtccaaatgctgtgaca
cgactctatcaacaggaattatgtggaagtccccagcaggagcttcatggttattccagg
cagagactgggtagcagtgatcaagggcagaagtctccataccgtggaaaccatggtggt
ctatccagcccagcatcttcaggatcacaaatctatggtgatggttctatatctcctagg
actgatacagtgggaagtcctgatgtgtttacgagaaataatccaggatttcatgctggg
ccaaactccagtcctgttcacatcaatagaataccccattccccaccaacggttctgatg
caaaattcttcatcccacccatcctgtgctatggccggtaggacttctatacctctttca
ccaacaatgactacaaaaagtcctgtcatgaaaacgccctcttgcaattattcatcaaat
gttgatatgccaagaattatgtttcacaaacctccccaaggagcctcaacatcatgtgct
ctccagaaaaagccattaccctctgaaaaggatccattaggcatccttgaccccatacca
agtaaacctaacccagtacttatgagcacatctaacttcccaacaaccatgcactctcag
gtacctatgatgaatgtaaacatgcctcctgctgttgtccctttgccaagcaacctacca
ttgccaacagtcaaacctggccctgtaaaccatggaacccatgtcccacgggtccaacat
tcaacatccacatctgtatctcctgcacctgtcgcctcacctgtacacatgatgggacct
gtaatgggaagaattgaggcatcaccacagaggtcgaggtcgtcttctacatcatctgat
catggaagtttaatgatgccacctgcaggtcctcagtcaagctgcagtggaataaaggtt
cctccaaggtctccaaggtcatctatgggttctccacgaccatccatgccatccagtcca
tccaccaagcctgaagggctttttcatcaatataaagatattcctaatccattattggtt
ggaatgaacaatgttctgaatcctcaaagtaatcctttgtttccatctgtatctgttgga
aatgtaccacagcagaagggtcagccaggtttgcttggaatgcccttaaatcaaattttg
aaccagcataatgctgcctcatttccagcaagtagtttactttcagcagcagccaaagca
cagctagcgaatcaaaacaaactgtctggtagtaacagtggtggtggagttggcagtggt
ggcaatagtgaaggacatagcactttaaataccatgtttcctccagctgccaacatgctt
cttcccattaatgaaggtcagagtggacgtgcggctctgagagacaagctcatggcacag
caaaaggatcctttaaggaaacggaaacaaggaactcctacagtattgagtatgttaaaa
cagtctcagatgggcagctctggagtcccaaagtctgtgattgactctgtaaggaaacaa
ggacaaaattcatccttaaccatgaataataccatgtctcaattacttcagtcaatgagt
tcgcaaagttctcaaataagtggcaatagcagcactagttgtggtagttccactacaggt
atttctggttcctccaaccaacatagcttctcaaataccagtctgaactcaggttccatt
cataacctatcagctcaaaatttaacaagaggggaaggtatttcttgccaaaatacaagt
actaatttaatccacaattgtcagggcccaaacaatcaatttgttgggttagttggacag
ctccatggtaatggaaattgtgggctgcttcatcagtctgcaatgactttgggaaataat
ttgcattctaaccaccattcaagaattgcagcctcttcagcagcaatggtaccaaacagc
agtggcatttgtagccaaaccagtgctgacacaggagggcaggatggtccatcccatgga
catctccacagacggcaacgttgttctttggtcaacctgtcaggaggtagttctggccag
ccagcatccatggccattgctggtaccaaccaacttgccattaccaagacaacatccgtt
ctgcaagatggagttatagttacaacagcagctggaaatgcaatgcatagtcagattcct
gtggggagcactcttccattcattggtcaggaccaagcctttcaatttggacaggctgtt
cctacaagtagtaatcttacccaccctttgaacccaaatctgcttggctctctgtccatc
cccttagcaatgagccaacaacagctcctgaaccaaaatatgctgaacatgttacctaca
tctggagatggcaagggagaagtctctgttaaccctttgggaattctgaacccaacctta
aattcagctttgactttgctccctggggacatggctggacagactctgcaacctgttcaa
cttttggctaccttatttcaaaatcaggcacaagctaccatgctcccactgacatctttt
aatttaactctgccagatttattacagcagcaaaaccacccttcaccttcagtgacacag
atccagcccctgccagatcatttgcatagcaatcaattagttagtaacaggacagaaact
cttttgacaaaccctctaacaagccctccaaacaatgacactacttcaaaccccctcctc
cttccagctgtcacagcagccccaggactgatggccctgaatccccatctgttgagaagt
gttttgcactctccttcagatcgtgctgccaaccattctgaggtttccatagcaacctca
acccaggcaactactaccactaccacatcatcatccgtagcagcacttgccgtctcaact
cttggtgggacagcagttatgtcaatggcagaatcgctgctgcccatctcagctgctggg
cattcaacaggacctacaaaattgaacaactctttgctaccacacctccctttgctggga
gcgagccttcttggtgatgtaccttcattcaacaacaatttgaataatccacaattaagt
cggctccagaccttaatgaatagcaatcagatgtttcctcagaatcatcaacttttacaa
ggtctgcaagggactcggggtcttcaggggtttcaaggtcctccttcattttctggaccc
agtaacccacagaatcccatggcatgcgtttttcaaaactttcagcaggtgagtccagcc
caagatgtctctctttcaaatgctccagtaaactcccatccaggaacaatattgctgtct
gagggatctcaaactgcccttccccctttccatgatctgtctggtgaccaacatcaaatg
ggacaggttcaaggtcagcaaggcagagaagaagcccccagtgtgggtccccatgaccct
tctgttgatgctatatataaagctgtggtggatgctgcgagcaaaggaatgcaagttgtg
atcactacagcaatgagtagtacttctcaaatgagcccaatcccagccctgagtgccatg
agtgcctttactgcctccattgcaaatcctgtgaatctttccaatgcagtcaatgcagtg
attcatgggaaaagactttccagcatggagattgacaaccggctccacagtcaaaacatt
ctcgcaagtagacatgccagaggtgtgaagttgagaaaaagcactgaacaagcaaaaatt
actcctgaaggggaaggatttgagtacttcaaatcaccaggtcgcaacacgccgaaaaaa
cagtgggaaactgagcaacttgcagctggcgatacaacagtgtggaaatgtgagaagttt
ctcgaacactctgggcaggtaaatcatagtccctctgtggacaggataccttcttttcat
ggagagcagactgatggagtgttacagcagaaaaactgtcacttggacaaaagatttgtt
gaggatggttttaagtttaatagtcaaaaaagacacattgttaacattaaagaaagacta
gagaatactttggaaagatgcacacacatcaatggaaacaggtctcaacagaacaggaac
tttagtgagttgctaacagcacctaagcaagaacttgccatagaggagcaatctccaagc
tcctcggctagtttggagggaatgccaggttctttggcacatgactatattcagtacaat
ggagattacagttcggaaaacattaatggttgtgctccaagtccttcagacactaaaagt
atcagcagcgatgatgatttgaagattccagattctccatctaacgaattaatacactat
agaccaaggacgtttaatgttggtgacttggtctggagtcaaataaaaggatttccttca
tggccaggaaagttggtgagagaagatgaagtccacaattcctgtcagcaaaactctgaa
gagggaaaggtacaccagacacctcagaaggacagacaagtcaagtcaccaaaagccaag
agacgaaaaatctctagataa
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integrated database retrieval system
