Hemiscyllium ocellatum (epaulette shark): 132817070
Help
Entry
132817070 CDS
T09720
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04145
Phagosome
hoc04148
Efferocytosis
hoc04510
Focal adhesion
hoc04512
ECM-receptor interaction
hoc04810
Regulation of actin cytoskeleton
hoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132817070 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132817070 (itgb5)
04148 Efferocytosis
132817070 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
132817070 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132817070 (itgb5)
04810 Regulation of actin cytoskeleton
132817070 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132817070 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hoc04515
]
132817070 (itgb5)
Membrane trafficking [BR:
hoc04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
132817070 (itgb5)
Cell adhesion molecules [BR:
hoc04515
]
Integrins
Integrin beta subunits
132817070 (itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
132817070
NCBI-ProteinID:
XP_060683150
LinkDB
All DBs
Position
7:47285323..47411423
Genome browser
AA seq
806 aa
AA seq
DB search
MQKAMFKKMSLNYLFLPYLVFYLLLQDVSGSNICTSGRATSCKECLLIHPDCGWCVQEEF
GNKGNFSSRCDFRESLIKRGCSIHFIESPQSSIQIERNLPLSNKGSGSSQSDVIQLAPQR
IALTLRPDHETTFRMHVRQVEDYPVDLYYLMDLSLSMKDDLDNIRVLGTTLSREMAKLTS
NFRLGFGTFVDKPTSPFSYTGPKYQNNPCVGYKLFPQCVPSFGFRHLLSLTDKSDKFNAE
VQKQMVSRNRDAPEGGLDAILQAAVCKKKIGWRKEASHLLVFTTDDVPHIALDGKLGGLV
QPNDGQCHLDENNEYTSSTQMDYPSLALLGEKLAENNIHLIFAVTQSHYILYKNFTALIP
GTTVEILDKDSKNIIQLIVNAYSSIRSKVELTVGDQPKDIELSLTATCQDGVSRPGVRKC
GDLKIGDTVSFDVTVEARSCPEAQTRNSFTIKPVGFKDSLSITFGYICNCDCTSGMQASS
SKCNGNGTYECGICKCDPGFLGANCECLDGETNNVFQTFCHEAEGRPICSGRGECSCNQC
VCYESEFGRIYGTFCECDDFSCARHKGILCSGHGDCHCGECKCHASWIGDNCNCSTEMDS
CLSDDGQMCSGRGNCACGRCSCTEPGAFGDTCEKCPTCPDACGMKRECIECRLFNSGRLA
DNQTCQKLCKDEILTVDVLKTDDQDAVLCLYKTENDCVMRFTYSEHDSGKSVLTALKEPE
CASETDPVTVLIAVVGSILTVGIVLLAIWKLIVTIHDRREFARFQNERSRARYEMATNPL
YRQPITTHTVEILSKMQNISYNGIVD
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagccatgttcaagaaaatgagtttaaattatttgtttttaccgtatctagtt
ttttacctgttgttgcaagacgtcagcggttccaatatttgtacaagtggacgtgctacc
tcctgcaaagagtgtttgcttattcatcctgactgtggatggtgtgttcaagaggaattt
ggcaacaagggaaacttctcatcaagatgtgactttagggaaagtttgattaaaagagga
tgcagtattcactttatagaaagccctcaaagcagcatacagatagaaagaaacttacca
ttgagcaataagggatcaggatcatcgcaatcagatgtcattcaacttgcacctcaaagg
attgcactcacactaagaccagaccatgagacaacatttcgtatgcatgtacggcaggtg
gaggattaccctgtggatttgtactatcttatggatctttccctatccatgaaagatgat
ttagacaacatccgtgtgctgggtacaacgttatccagagagatggcaaagctcaccagc
aactttcgtctgggctttggaacatttgttgacaagccaacatcaccattttcttacaca
ggaccgaaataccagaacaacccatgtgtaggatataagctgtttccacaatgtgttcca
tcttttggattccgtcacttgctgtcactgactgacaagtctgacaaattcaatgcagaa
gttcagaaacagatggtatctcggaatcgtgatgcaccagagggtggacttgatgcaatc
ctgcaggcagccgtttgcaagaaaaaaataggctggcggaaggaggcttcccacttgctg
gtatttaccacagacgatgtaccgcatattgcattggatggcaagcttggtggtctggta
cagcccaatgatggacagtgccacctcgatgaaaataatgagtacacttcctcaacacaa
atggattacccatcacttgcacttcttggagaaaagttggcagagaacaacatccatttg
atatttgctgttactcagtcccattacatactttataagaattttactgctttgatccct
ggaacaactgtagaaattcttgacaaggattcaaagaatataattcaactgattgtcaat
gcttacagtagtattcggtccaaggttgaactgacagtaggggaccaaccaaaagacatt
gaactttctttgacagccacatgtcaggatggtgtttcacgccctggtgtgagaaagtgt
ggtgatcttaaaattggagacacggtgtcttttgatgtcactgtagaagctaggagctgc
ccggaagcccagaccagaaatagcttcaccattaagccagttggcttcaaagattcactc
agtataacgtttggttatatttgcaactgtgactgcacaagtgggatgcaagccagcagc
tccaaatgcaatggtaatggaacctatgagtgtgggatctgtaagtgtgatccaggcttt
ctgggagccaattgtgaatgtctggatggagaaaccaataatgtattccagacgttctgc
catgaagcagagggaagaccaatctgcagtggcagaggggaatgcagctgcaaccagtgt
gtctgctatgagagtgagtttggaaggatttatgggactttctgtgaatgtgatgacttc
tcatgcgcgaggcacaagggcatactctgttcagggcatggagactgtcattgtggtgaa
tgcaagtgtcatgccagctggattggagacaactgcaattgttcgacagaaatggactca
tgcctgtcagatgatgggcaaatgtgtagcggtagaggaaactgtgcatgtggccgatgt
tcatgcactgagcctggagcatttggggatacctgtgagaagtgcccaacctgccctgat
gcctgtggcatgaaaagggagtgtatagaatgtagattgtttaattctgggaggctggct
gacaatcagacttgtcaaaagctctgcaaagatgagatcctgactgtggatgtcctcaaa
acagacgatcaggatgcagttctctgtctgtacaagactgaaaatgactgtgtcatgagg
tttacttattcagaacacgacagtggaaaatctgttcttactgctttaaaggaaccagaa
tgtgcaagtgaaactgatccagtaactgtattgatagctgtagttggtagtattttgaca
gtgggcattgttttgcttgccatttggaaactgattgtcactattcatgatagaagagag
tttgccagatttcaaaatgaaaggtccagagcccgatatgagatggcaaccaatccactg
tacagacaacccataaccacacatactgtggagattctttcaaaaatgcaaaacatatct
tacaatggtatagttgactga
DBGET
integrated database retrieval system
