Hemiscyllium ocellatum (epaulette shark): 132817095
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Entry
132817095 CDS
T09720
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132817095 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hoc03041
]
132817095 (prpf40a)
Spliceosome [BR:
hoc03041
]
Complex A
U1 snRNP components
U1 related factors
132817095 (prpf40a)
Complex B
132817095 (prpf40a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
DUF4936
Motif
Other DBs
NCBI-GeneID:
132817095
NCBI-ProteinID:
XP_060683218
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Position
7:59544011..59613814
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AA seq
901 aa
AA seq
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MSTSDTSNGPGQPTSFGNAPPMIPPPFMGPPGMPPPFPPMGMPPIGQRPPNMPPLPPGMM
PPMIPPMAGPPMGQMPGMLPPMMTGMMMSRMPTAPIQASAPPPGVSTTVTEVTSASPATI
VQVTNPTVSSVQQISATNESSGEEQPKKKSVWTEHKSPDGRTYFYNSETKQSTWEKPDEL
KSHAEQLLSKCPWKEYKSDTGKPYYYNSQTKESRWTKPKELEELEEMIRAEEENGVKEAS
LSTVSTSVQEATTTTPVEVTENEVTTSEDHEKEQTIAVEQPEPEPVQITSQPAEEVTKQE
IQENDIPKKEEEVKKEPVRKTYTWNTKEEAKHAFKELLKEKGVQSNASWEQAMKMIINDP
RYSALPKLSEKKQAFNAYKIQTEKEEKEEARLRYKEAKENFQRFLENHEKMTSTTRYRKA
EQMFGETEVWTAVPERDRQEIYEDVLFFLAKKEKEQARQLRKRNTQALKNILDNMANVTY
CTTWSEAQQYLMDNPTFAEDEELQNMDKEDALVCFEEHIRALEKEEEEEKQRGLLRERRR
QRKNREAFQTFLDELHESGHLHSMSTWMELYPAISADIRFSKMLGQPGSTPLDLFKFYVE
DLKARFHDEKKIIKDILKDKSFVVEVNTTFEEFGTVISSDKRAATLDAGNIKLTFNSLLE
KAEAREREREKEEARKLKRKETAFKSMLKQATPPLEPESNWDEVRERFVNESAFEDITVE
SERKRLFKEFLQILEHECQHHHSKSKKHSKKSKKHHRKHSRSRSASESEDDDYHHSKKKK
RSHSKSPSDRTSSEESERSYKKSKKHKKKGKKRRRKSVTPESEGERERERERERDRDRRE
KERSRDDEKERNRHRSQSKHKSPRKATNKDTANWETSDSELSEGELEKRRRTLLQQLDDD
Q
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatcagatacatcaaatggaccaggacaaccaacatcttttggaaatgcccct
cccatgattccaccaccatttatgggaccgcctggtatgcctccaccgtttccaccaatg
ggcatgccacctattggccagagaccaccaaatatgccacctttgccaccaggtatgatg
ccaccaatgattcctccaatggccggaccaccaatgggacagatgcctggaatgttgcct
cccatgatgacaggaatgatgatgtctcgtatgccaactgctcccatacaagcaagtgca
cctccgccaggggttagcaccacggtgacagaagtaacatcagcatccccagccactata
gttcaggttacaaatcctacagtttctagcgttcagcaaatttctgctactaatgaatct
tctggagaagagcagcccaaaaagaaatctgtttggactgaacacaaatctccagatgga
agaacctatttctacaattctgagacaaaacagtccacgtgggagaagcccgatgagctg
aaatcacatgcagagcaattattatcaaagtgcccttggaaggaatacaaatcagacact
gggaaaccgtattattataattctcaaacaaaagagtctcgatggacgaaaccaaaggaa
ttagaggaattggaagaaatgatcagagctgaggaagaaaatggtgtaaaggaagcttct
ctttccactgtgtcaacttctgttcaagaggcgacaacaaccaccccagtggaggttact
gagaatgaagttacaacctctgaagatcatgaaaaggaacaaacaatagctgttgagcag
cctgaacctgaacctgtacagatcacttctcaaccagcagaagaagtaacaaagcaggag
attcaagaaaatgatattccaaaaaaagaggaagaagtgaaaaaagaaccggtgaggaag
acctatacctggaacacaaaagaggaggcaaaacatgcatttaaagagctgttgaaggaa
aagggtgttcagtcaaatgcctcatgggaacaagcaatgaagatgattataaatgatcct
aggtatagtgcattaccaaaacttagtgaaaagaaacaagcatttaatgcatataaaata
caaactgaaaaagaggaaaaggaagaagctagactccgctataaagaagcaaaagaaaac
tttcagcgatttcttgaaaaccatgaaaaaatgacatctactaccagatacaggaaagct
gaacagatgtttggagagacggaagtgtggacagcagttcctgaacgggatcgacaggag
atctacgaagatgttttgtttttcttggccaaaaaagaaaaggagcaagcaaggcaatta
agaaagaggaatacgcaagcactgaaaaatatccttgacaatatggctaatgtaacatac
tgcaccacgtggtcagaggcacagcagtatttaatggataatccaacatttgcagaggac
gaagagttgcaaaatatggataaagaagatgctcttgtttgttttgaagagcatataaga
gcattagagaaggaggaagaggaggagaaacaacgaggtttacttagagagcggagaagg
cagcgcaaaaatagggaggcctttcaaaccttcctggatgagttgcatgaaagcgggcat
ttgcactccatgtctacctggatggaattgtatcctgctatcagtgctgatattagattt
tctaaaatgttgggccaacctgggtctactccccttgaccttttcaaattttatgtagaa
gacctaaaagcacgcttccacgatgaaaagaaaataataaaagatattttgaaggataaa
agttttgtggtagaagtcaatactacatttgaagaatttggtacagtcattagttcagac
aagagagcagccacgcttgatgctggtaacattaaactaacttttaacagcctgttagag
aaagcagaagctcgagaacgtgaaagagaaaaggaagaagctcggaaactaaaacgaaaa
gaaactgctttcaaaagcatgttaaagcaagccactcctcctcttgaaccagaatcaaat
tgggatgaggttcgagagaggtttgtaaacgaatctgcttttgaagacattactgttgaa
tctgagagaaaaagacttttcaaggaatttctacaaattctcgagcatgaatgccaacat
catcattcaaagagcaaaaaacattccaagaaatcaaaaaagcatcacaggaaacattct
cgttctcgttcagcctcggaatcagaagatgatgattatcaccattcgaagaaaaagaaa
cgttcccattcaaagtctccttcagacagaacctctagtgaagagtcagagcgaagctac
aaaaagtccaaaaaacacaagaaaaagggcaaaaagagaagacgtaaatctgttactcct
gaatctgaaggagagcgagaacgtgaacgggaaagagaaagggaccgggatagacgagaa
aaagaaagaagtagggatgacgagaaagaaagaaatagacacagatcgcagtcaaagcac
aaatcacccagaaaagctaccaacaaagatacagcaaattgggaaacctcagatagtgag
ctaagtgagggggaattggaaaaacgaaggcgaactctcttgcagcaacttgatgatgac
caataa
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