Hemiscyllium ocellatum (epaulette shark): 132817146
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Entry
132817146 CDS
T09720
Symbol
itgav
Name
(RefSeq) integrin alpha-V
KO
K06487
integrin alpha V
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04145
Phagosome
hoc04148
Efferocytosis
hoc04510
Focal adhesion
hoc04512
ECM-receptor interaction
hoc04514
Cell adhesion molecules
hoc04810
Regulation of actin cytoskeleton
hoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132817146 (itgav)
04514 Cell adhesion molecules
132817146 (itgav)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132817146 (itgav)
04148 Efferocytosis
132817146 (itgav)
09144 Cellular community - eukaryotes
04510 Focal adhesion
132817146 (itgav)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132817146 (itgav)
04810 Regulation of actin cytoskeleton
132817146 (itgav)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132817146 (itgav)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hoc04147
]
132817146 (itgav)
04515 Cell adhesion molecules [BR:
hoc04515
]
132817146 (itgav)
04090 CD molecules [BR:
hoc04090
]
132817146 (itgav)
Membrane trafficking [BR:
hoc04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
132817146 (itgav)
Exosome [BR:
hoc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132817146 (itgav)
Exosomal proteins of epithelial cells
132817146 (itgav)
Cell adhesion molecules [BR:
hoc04515
]
Integrins
Integrin alpha subunits
132817146 (itgav)
CD molecules [BR:
hoc04090
]
Proteins
132817146 (itgav)
BRITE hierarchy
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
LYRIC
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
132817146
NCBI-ProteinID:
XP_060683334
LinkDB
All DBs
Position
7:76126349..76261161
Genome browser
AA seq
1038 aa
AA seq
DB search
MASVATGIGRWALAVFLFTLSCCYGFNLDTTNPSVYSGPPGSYFGFAVDFFTPVPTQINI
LVGAPKANTSQPNIVEGGAVYKCPWNNGAGNCEQFEFDKTGNRFLSPDDLLEFKSYQWFG
ASVRTQGNKILACAPRYHWRTLSRQEREPVGTCFLADGDKIVEYAPCRSGKTGADGQGFC
QGGFSIDLTGAGRVVLGGPGSFYWQGQLISDEIQEIVTMYNSSEIITTYPQQISTRGANA
AFDDSYLGYSVAVGNFSKDSVEDFVTGIPRGAKSLGYVTILNGANMESLHNFTGEQMAAY
FGYSVAVTDLNSDGLDDLLIGAPLFMVRGSDGKYREVGQVYVYLQKSPLSFTDALKLTGT
ETYARFGSSIAPLGDVDQDGYNDVAIGVPYAGENHRGLVYIYNGKSSGLNPQSSQTLEGQ
WASDNMPASFGYTMQGAFDIDTNGYSDLIVGAFGADKAVVYRARPVIHVNASLEVNPSIL
NPENKSCTLREGVMVSCFTVKFCLSAFGARATDFLDFNVELQLDRLKQKGAIKRAMFLHS
SLSSYEKKMKVENSRRKVCEELQAFLRDENEFRDKLTPIAIYMEYSLDVQTPTDGNGLQP
ILNQFTPNNITKQARILLDCGDDNICKPDLKLSVRGDRKQLYIGDDNPLTLHINAQNEGE
GAYEAELYIILPQQADYVGVVRNNKSLTRLSCAYKTENQTRIVVCDLGNPMKAGTNLWAG
LRFSVRELQDAEAAVTFDLQIRSSNEHNSTSEMVSYTVDITVLAQVEIRGVSSPDQLFLP
IGNWKSKPQSEEEVGPQVTHVYELRNNGPSAFSKAILDLQWPYRYKENYLLYIMEYIPEG
PMNCTSKTIINPLNLKSASSITNQTTSPTASVKHEHNIKRRDTTESEGIEVLGCDNAECV
KINCQIGRLERDKSVVLHIRSRLWGETFMKKENQSYSLMASASYSVIELPYKNFSTELPT
GSIVVTTLVTWDKVITPHPVPVWVIILALLAGLLLLALLVFVMYKFGFFKRVRPPRKDSI
ERQQLQPQEMNGDGATET
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgtagctacaggcattggacgctgggcgctggcagtgttcttattcacactc
tcctgttgttatgggtttaatttggacaccactaacccgtctgtttattccggacctccg
ggcagttacttcggatttgctgtggattttttcacacctgtcccaacacagataaatatt
ttagttggagccccaaaagcaaatacttctcagccaaacatagtcgaaggtggggcagta
tacaagtgtccctggaacaatggggccggcaactgcgaacaattcgaatttgacaagaca
ggtaatagatttctaagcccggatgatctgctggaatttaaatcctatcaatggtttgga
gcatccgtgagaactcagggcaacaaaattctggcttgtgctcctcgttatcattggaga
accttaagtcgccaagagcgtgaaccagtgggtacctgcttccttgcggatggggataag
atagtggagtatgcaccatgtcgatcaggtaaaactggagctgatggtcaaggattttgt
caaggaggtttcagcattgaccttacaggggctggtagagtggttcttgggggacctgga
agcttttattggcaaggtcaattaatctctgatgaaattcaggaaattgtgacaatgtac
aattcatcagagatcatcacaacatatccccaacaaatttcaactcgtggagcgaatgct
gcgtttgatgacagctaccttggctattcagttgctgttggaaactttagcaaagattca
gtagaagattttgtaactggcatcccaagaggagcaaagtccttaggctatgttactatt
ttaaatggagcgaatatggaatccctccacaattttactggggaacagatggctgcatac
ttcggttattctgttgcggttactgatctcaacagtgatggacttgatgatcttttgatt
ggagcacctctttttatggttcgtggttctgatgggaagtacagagaagtgggccaggtg
tacgtttatctacaaaagtcaccgcttagctttacagatgccctgaagctgactggcaca
gagacgtatgccaggtttgggtcttcaattgcacctctcggagatgttgatcaagatggc
tataatgatgttgcaataggagttccttatgcaggggaaaatcatagaggtctggtttat
atttataatgggaaatcttctggtctaaaccctcagtcttcgcagactttggaggggcag
tgggcgtcagataacatgcctgcaagctttggttataccatgcaaggagcttttgatatt
gacacaaatggatattcagatttaattgtaggagcttttggtgctgacaaagcagttgtt
tatagagccagacctgtaatacatgtgaatgcttcattagaagtcaacccatcaattttg
aatccggaaaacaaaagctgtacactgagagaaggtgtcatggtctcttgttttacagtt
aagttctgcttaagtgcatttggagcaagagccacagatttcctggattttaatgtggaa
ctacagctggatagactaaaacagaagggtgcgatcaagagagctatgtttcttcacagt
tctctttcttcttatgaaaagaaaatgaaagtagaaaatagccgaagaaaagtttgtgaa
gagttgcaagcctttctgagagatgagaatgaattcagagataaactgactccaattgct
atctatatggagtatagcctggatgtacagaccccaacagatgggaatggacttcaacca
atcctcaaccaatttaccccaaataatatcaccaagcaggcacgtattttactggattgt
ggtgatgataacatctgcaaacctgatcttaaactgtctgtgagaggggatcgaaaacaa
ttgtacattggtgatgataatcccttaaccctgcatataaatgcgcaaaatgaaggtgaa
ggggcctatgaagcagagttatacatcatattgccacaacaagcggattatgttggggtt
gttcgcaataataaaagtcttacaagattgtcttgtgcttacaagacagaaaatcaaaca
cggatagtagtttgtgaccttggaaaccccatgaaagcaggaacaaatctctgggctggt
cttcgatttagtgtacgtgagctgcaagatgccgaggcagctgttacctttgacctgcag
attcgaagttccaatgaacacaattcgacaagtgagatggtttcttatacagttgacatt
actgtcctagctcaagttgaaatacgaggtgtttcttctcctgatcagctgtttctaccc
atcggaaattggaagtctaaaccgcagagtgaagaggaagtgggtccacaagtcactcat
gtctacgagttacggaacaatggaccaagtgcatttagcaaagccatattagatcttcag
tggccatacaggtataaggagaattacctgttgtacataatggagtacatacctgaaggt
cctatgaactgtacctccaagacaattatcaatccactgaacttaaagagtgcaagttca
attacaaaccagacaacatctccaactgcaagtgtgaaacatgaacataatataaaacgc
agagacacaactgaatcagaagggattgaggtgctgggatgtgacaatgcagaatgtgtg
aagattaactgtcagattggcagactggaaagagacaagagtgtggtcctgcacatccgg
tcacgactatggggtgaaacattcatgaaaaaagagaaccagtcatactccttgatggct
tctgcatcatacagtgtcattgaattgccatataaaaacttctctactgaacttcccacc
ggatccattgtggttactactttggtgacttgggataaggtgattactcctcatccagtg
ccagtttgggttatcatattggcactcctagctggtctactccttctagctctcttggta
tttgtcatgtataaatttgggtttttcaaacgtgtccgaccgccacgtaaagattctatt
gaacgacagcaactccaaccacaggaaatgaatggggatggagctacagaaacataa
DBGET
integrated database retrieval system
