Hemiscyllium ocellatum (epaulette shark): 132817160
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Entry
132817160 CDS
T09720
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132817160 (lrba)
Membrane trafficking [BR:
hoc04131
]
Endosome - Lysosome transport
Others
Others
132817160 (lrba)
Endosome - Golgi transport
132817160 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
132817160 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
WD40_Prp19
Neurobeachin
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
SUKH_6
EIF3I
Motif
Other DBs
NCBI-GeneID:
132817160
NCBI-ProteinID:
XP_060683364
LinkDB
All DBs
Position
1:complement(163073940..163940774)
Genome browser
AA seq
2869 aa
AA seq
DB search
MSSEGDRPQLADAEGGQAATAPGERAADKGHASQPFGARSSPDGDAAVSLGLNPPVPIRG
IRMKFAVLSSLMQAGEVTHRDIVETIFNLLVGGQFDLEMNFIIQDVESIACMVKMLDSCD
VTCQAEVWSIFTAILKKSICNLQACTDAGLIEHVLKRIHGVNNMIADLLVDMLGVLASYN
ITVRELKLLVSKVQGEKQQWPPHAVKLLTILRQVPQKLSPDAFFSFPGKSAAAIALPPIA
KWPYQNGFTFHTWLRMDPLNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKG
KGFQHCVKYDFKPQKWYMVTIVHIYNRWKNSEIRCYVNGELASFGEITWLVNTSDTFDKC
FLGSSETADANRVFCGQLGAVYVFAEALNAAQIFAIYQLGPGYKGTFKFKAESDLLLAEH
HKSLLYDGKLSSSIAFTYNPKATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVVTHSV
QSAIHSIGGIQVLFPLFAQLDYRQHSSDQVDSTVCSTLLAFIMELLKNSVAMQEQILSSK
GFLVIGYSLEKSSKVHITGAVLELCLAFAKYLSNLQNGGPLLKQLCDHILLNPAIWIHAP
AKVQLQLYTYLSTEFISTATIYNAVRRVGTVLQIMHTLKYYYWVVNPQDRSGVVPKGLDG
LRPNQKEILSLRALLLLFVKQLIMKDHGIKEDELQSILNYLLTMHEDDNLMDVLQLLVAL
MSEHPGSMIPAFDQRNGMRIIYKLLASKNEGIRVQALKVLGYFLKHLAPKRKAEVMVGHG
LFSLLAERLMLHTNVISMTTYNVLFEILTEQICTQVVHKQHPDPDSSVKIQNSQILKVIA
TLLRNSPQMLETMEVRRVFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYINAKNSEE
QKITEMVYAIFRILLYHAIKYEWGGWRVWVDTLSITHSKVTYEIHKESLARTFEEYQRQD
ENTKQIPTIQTISEISSTQEATIQKDVFEVQSAPHSENVEKQLEKADGFKQLEGYQEASS
LNTEVQQKNMEQTDKIKKTTESLDGTEVTKVITQVDQISNKLPASLESFEVEKSEVTEMC
MEDVDCSAARSTDLFSDEMTESEVTKVKEKTTTAITTNGQEHNVALDPCDPKVDVVEYSN
NGQQNSINSEENCVSELQDTSQEVNISTTTASKESSSSSEAVSNHSASVLQEEIIKVKQE
MAKLQTESSTEPLKELDSHTADSSTHDSNSPDKDIGTINTKTRELKVLSAKEIARLDVSS
VASDTERLELRASISQESTMVPKPPMQLSQLELTNQQSVVSDEQRKGSNPSGRATMFRIP
EFKWSPMHQRLLNDLLFSIETDVQMWRSHNTKTVMDFVNSSENIIFVHNTIHLVSQVVDN
IIMACGGILPLLSAATSTTHELENIEPTQGLSFETSVTFLQRLIGLVDVLIFASSLSFTE
IEAEKNMSTGGILRQCLRLVCGVAVRSCLECQQVSRTKSGADNAKTQKTMQSLLGSGKLT
AKSSTDVATGGISPVRDLDRLLQDMDINRLRAVVFRDVEDSKQAQFLALAVVYFISVLMV
SKYREILEPQKDRKLSRSQSVRSTENTDGTTSTTEGSSATAVPVASDDAPHAPIRRDSGI
GEDQALSSLTELAAGNETMSEVVSTGPDAMSELLSTLSSEVKKSQSQESKDEIGSDSESK
TTCSIPSRSQSKNVNVKEILRSLVNTPADSLEADMTLIGPTFLGVIGDAAGESSVQFRSF
DRSVVIAPKKPLFAAGSEIVTPATTDAVSVVSTTDSAEDAAIEPTGGGPSNSKLPSVQTV
SPMPEDSAANMSITARLERALEKTAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVC
MKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLCHTMKDHLVRVANEAEFIL
SRQRAEDIHRHAEFESLCAQYSAERREEEKMCDHLIRAAKYRDHVTATQLIQKIINILTD
KHGAWGSSSLSRPREFWRLDYWEDDLRRRRRFVRNLFGSTHPEAALKAAIEHGSEEDVLA
KGRQSIRSQAVGNQNSESEILLEGDDDTLTSLEEKEIDNMAGPVNFTTAAQLIAPAVVAK
GTLSITSSELYFEVDDDDPSYKKLDPKILAYTEGLHGKWLFTEIRAIFSRRYLLQNTALE
IFIANRTAVMFNFPDQATVKKVVHCLPRVGVGTGFGLPQTRRITLASPRQLFKASNMMQR
WQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIG
ALNPKRAAFFSERHENWEDDQVPPFHYGTHYSTSSFTLAWLLRIEPFTTFFLNLQGGKFD
HADRTFSAVSRAWRNCQRDTSDVKELIPEFYYLPEMFVNSNNYNLGVMDDGTVVSDVELP
LWAKTPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVN
LNSISDLVLREAVEAQIRSFGQTPSQLLIEPHPPRSSAMQVTPLMFTDQMQQDVIMVLKF
PSNSPVTHVAANTQLGLAVPAIITVTASRLFAVNKWHNVTGLHGAMQEQPYQLPVEIDPL
IANNTGMHRRQITDLLDQSIQVNSQCFVITADNRFILVCGFWDKSFRVYSTETGKLSQVI
FGHWDVVTCLARSESYIGGDCYILSGSRDATLLLWYWNGKKHSVGEYPNNEYAAPRAILT
GHDCEISCAAICAELGLVISGSKEGPCLIHTMNGDLLKALENPENYLHPRLIQLSTEGHC
IIYYEKGQFCVFSVNGKLLSKMETEDSVKAMLLSRDGQYLIAGGDSGIVAVWQVWDLKQL
MTYPGCDAGIRAMAMSHDQRVIITGMASGSIVLFYIDFNRWHHEYQTRY
NT seq
8610 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgagggtgaccgtccgcagctcgcggacgccgagggaggccaggctgccacg
gcaccgggggagcgagcggcggacaagggtcatgcctctcagccgttcggcgccaggagc
tcaccggacggcgatgcggctgtctccctgggcctcaacccgcccgtacctattcgtggg
atccgaatgaaattcgccgtgctgtcaagtctcatgcaagccggtgaagtgacccatcgt
gacatcgtggagaccatatttaacctgcttgtaggaggacaatttgacttggagatgaat
ttcatcatacaagacgtggagagcattgcttgcatggtgaagatgttggacagctgcgat
gttacctgccaggctgaagtttggagcattttcacagcaattctgaaaaaaagtatttgc
aatctacaggcctgcacggatgcagggttgattgaacatgttcttaaaagaattcatggc
gttaacaatatgatagcagatctgcttgttgatatgttaggagtgttggcgagctacaac
ataactgtccgcgagctgaaactactagttagcaaagtgcaaggagagaaacaacaatgg
cctccacatgcagtgaaattattgaccatattgagacaggtgccacagaaacttagtcct
gatgctttcttcagcttccctgggaagagtgctgctgcaatagctctgcctccaattgct
aagtggccctatcagaatggcttcacttttcacacatggctccgaatggatcctttgaac
aatatcaatgtggataaagacaagccttatttatattgttttcgtactaacaaaggactt
ggatattctgctcattttgttggtggttgtttgattgtgacatcaataaaatcaaaagga
aaaggattccagcactgtgtaaagtatgacttcaagccccagaagtggtatatggtgaca
atagtgcatatttacaatcgatggaaaaacagtgagatccggtgttatgtgaatggtgaa
ttggcatcctttggagagattacatggcttgtgaatactagtgatacatttgataaatgt
ttcctgggatcttcagaaacagcagatgcaaacagagtattctgtgggcaacttggagca
gtttatgtctttgctgaagctctaaatgcagcacagatatttgcaatatatcaattaggt
cctggatataagggtacgtttaaattcaaggcagaaagtgacctcttacttgctgagcac
cacaagtcactgctctacgatgggaagttgtcgagtagtattgcattcacttacaaccca
aaggccacagatgctcagctctgtctagaatcatccccaaaggataatccatctattttt
gtacattctccacatgctctaatgcttcaggacgtcaaagctgttgtaacacattctgta
caaagtgctatacattcaattggtggcatccaggtgctttttccattatttgcacagctc
gattacagacagcattcttctgaccaagttgacagcacagtttgctccacattgttggct
tttataatggaattactgaagaactctgtggccatgcaagagcaaatactctcttctaaa
ggctttcttgtcattggatatagcctcgaaaagtcttccaaagttcatatcaccggagct
gttttggaactctgtttggcatttgccaaatacctgagtaatttgcagaatggtggtcct
ctactcaaacagttatgtgaccacattcttctgaatcctgccatatggatacatgctcca
gccaaggttcagttgcagctctacacctacttgtccaccgagtttatcagtacagccacc
atttataatgcagtacgacgagttggtactgtgctgcagataatgcatacccttaaatac
tattattgggtagtgaatcctcaggatcgcagtggagttgttcccaaaggcctggatggg
ctcaggccaaaccaaaaagagatcctctccttacgggctcttttactattgtttgtgaaa
caattgataatgaaggatcatggtattaaggaagatgaactgcagagcattcttaactac
cttctcaccatgcacgaggatgacaatctgatggatgttctacagctgctagtggctctg
atgtccgagcatccaggatcaatgattcctgcttttgatcagaggaatggaatgcggata
atttataaactgctggcttcaaaaaatgaagggataagagtgcaagctttgaaagtgttg
ggatactttctgaagcatcttgctccaaagcgcaaagctgaagtcatggttggacatggt
ttgttctccttgctggctgaaagattgatgttgcacactaatgtaatttccatgactacg
tataatgtcttatttgagatcctaactgagcagatttgcactcaagttgtgcataagcag
catcctgacccagattcgtcagtgaagatacaaaactcacaaatactgaaagtaattgca
acattgttgaggaactctcctcaaatgttagaaactatggaggttcggcgtgttttttta
tcggatatgatcaaacttttcaacaacagccgagaaaacaggaggagcttactgcagtgc
tcagtatggcaagagtggatgttatctctttgctatatcaatgctaagaattctgaagaa
caaaaaataacggagatggtatacgctatcttccgaatattgctttatcatgcaataaag
tatgagtggggtggctggcgtgtctgggtggatacactctcaataacccattcaaaggtc
acttatgaaatccacaaggagagtttggccagaacatttgaagagtaccaaagacaagat
gaaaatacaaagcaaatcccgaccattcaaactatttctgagattagcagcacacaagaa
gctacaattcagaaagatgtttttgaggtccagagtgcacctcattctgaaaatgttgag
aaacaattagaaaaagcagatggtttcaaacaacttgaaggttaccaggaagccagttct
ctgaacactgaagtacagcagaaaaacatggaacagacagacaaaataaaaaaaacaact
gagtcacttgatggcactgaagtaactaaggtgataacacaagtagatcagatatcaaat
aaattaccagcttctttggaaagttttgaagttgagaaatctgaagtaactgaaatgtgc
atggaagatgtggactgttcagctgctcgttccacggatctgttttcagatgaaatgact
gaaagtgaagtaactaaagtaaaagagaaaacgacaacagcaattactacaaatgggcaa
gagcataatgttgcattggacccatgtgatccaaaggttgatgtggtagaatattcaaac
aatggacaacagaacagcataaatagtgaagagaactgtgtctcagagcttcaggacact
tctcaagaagtaaatatttcaactactactgcatccaaagagagttcaagcagttcagaa
gcagtttcaaatcactccgcgtctgtactacaggaggagattatcaaagtaaaacaagag
atggcaaaattgcaaacagaatcaagcactgaacccttaaaagaacttgacagccacact
gctgattctagcactcatgacagtaatagcccagacaaagatattggaacaattaacaca
aaaactagagagttgaaagtcttatctgctaaagaaattgctagattggatgtgtctagt
gttgcatctgatactgagaggttggaacttcgagcaagtataagtcaagaatctacaatg
gtcccaaagccccctatgcagttatcacaattggaacttacaaatcaacaaagtgttgta
tctgatgaacaaagaaaagggtccaatccctcaggacgtgccaccatgtttcgcattcca
gaatttaaatggtctcccatgcaccaacgcttgcttaatgacttgctattctccattgaa
acggatgtgcagatgtggcgaagccataacacaaagacagtgatggattttgttaacagc
agtgaaaacatcatctttgtccacaacactattcaccttgtctctcaggtggtagataac
atcataatggcctgtggtgggattctcccacttctatctgcagcgacatctaccacacat
gaattggagaacatcgaaccaacacaagggctgtcgtttgaaacctctgtgacttttctt
cagaggctaataggtcttgttgatgtgctgatttttgccagctcacttagcttcactgaa
attgaggctgaaaagaacatgtctactggaggaatattaaggcagtgtcttcgtttagta
tgtggtgttgcagtcagaagctgtttggaatgtcagcaagtaagtcgaacaaaatctggt
gctgataatgcgaaaactcaaaaaacgatgcagagcctccttggaagtggaaagttaaca
gccaagagttctactgatgttgcaacaggtggtatttcaccagtaagagatcttgaccga
ttgctacaagatatggacatcaatagacttcgagcagttgtgttcagagatgttgaggac
agcaaacaggcccagtttctagccttggctgtggtgtatttcatttctgtattgatggtg
tcaaaatatagggaaattctagaacctcagaaggacagaaaactgtctcgtagtcagtct
gtcagaagcactgagaatacagatgggactacatcaaccacagaaggttcatcagccaca
gctgttccagtggcaagtgatgatgccccacatgctccaattcgaagagactctggtatc
ggagaagaccaggctttaagttcactcactgagttggcagctgggaatgagacgatgtct
gaggttgtcagtactggtccagatgcaatgagtgaactattgtcaaccctttcctcagag
gtgaaaaaatcacagtcacaggaaagtaaagatgaaattggaagtgattctgaaagcaag
actacatgttctataccatctaggtcccaaagcaaaaatgtcaatgtgaaggaaatccta
cgaagtctggtgaacacacctgcagatagccttgaagcagatatgacattaatagggcca
acctttttaggagttattggagatgcagcaggagaatcatctgtacaatttcgttctttt
gacagaagtgttgtgatagctccgaaaaaacctttgtttgctgctgggagtgaaattgtt
acacctgctaccacagatgctgttagtgtggtctctactactgactctgctgaggatgct
gccattgaacctacaggtggtggaccatccaactcaaagctgccatctgttcaaactgta
tctccaatgccagaggactctgcagcaaatatgagtattacagcaaggcttgaacgtgca
ctggagaagacagcccctcttctgagagagatttttgtggattttgctccttttctttca
cgtactctactgggtagtcatgggcaagaattgctcattgagggtacaagcttggtctgt
atgaaatctagcagttctgttgtggaattggtcatgttgctctgttctcaggaatggcag
aattccattcagaaaaatgctggtcttgcatttattgagcttgttaatgaaggaagattg
ttatgccatactatgaaagaccacctggtgagagtagcaaatgaagcagagtttatcctg
agtagacaacgggcagaagatatacatagacatgctgaatttgagtctttatgtgcccag
tactcggcagaaaggcgtgaagaagaaaagatgtgtgatcacctaatacgagcagcaaag
tatcgagatcatgtgacagccactcagctgatacagaaaattatcaatattttgacagat
aagcatggtgcttggggaagttcttcactaagtcgccctcgtgagttctggcgccttgac
tactgggaagatgacttgcggcgccgccgacgattcgttcgcaacttatttggatcaaca
catcctgaagcagcacttaaagcggcaattgaacacggttctgaggaagatgtgctggct
aaaggcagacagtccattcgaagccaagctgtgggcaaccagaactccgagagcgaaatt
ctgctggagggagacgacgatacgcttacttcactggaagagaaggagattgataacatg
gcgggacctgtgaatttcaccactgctgcccagctcatcgcgccggctgtcgttgctaag
ggaacgctgtcaatcacctcttccgagctctacttcgaggtagatgacgatgatcccagt
tataaaaaactagaccccaagatactggcgtatactgaaggacttcatggaaaatggttg
ttcaccgaaatacgtgcaattttctccaggcgctatctattgcagaatactgctctagaa
atttttattgccaatcgaactgctgtcatgttcaacttcccagatcaagctacagtcaag
aaagttgttcattgtttgcctcgtgttggagttggtacaggttttgggctacctcaaacc
agacgaatcacccttgctagccctcggcaacttttcaaagcatccaatatgatgcagcgt
tggcagcggagggaaatctccaactttgaataccttatgttcctcaacacaatagctggt
cggacttacaatgatttgaatcagtatccagtttttccttgggtgataactaattatgaa
tcagaagagttggacctgacactgccaagcaacttcagagatttgtccaagcctattgga
gcccttaacccaaaaagagcagccttcttttcagagcgtcatgaaaactgggaagatgat
caggttcctccttttcactatgggactcattattcaaccagtagcttcactctcgcatgg
ttgttaagaattgagccatttactaccttctttctaaacctacaaggaggaaaatttgat
catgctgatagaacattttcagcagtgtccagagcatggcgtaactgtcaacgtgatacc
tctgatgtaaaggaactgattcctgaattttattatctccctgagatgtttgttaattcc
aacaattataatctgggtgtgatggatgatggaactgtggtgtctgatgtcgagcttcca
ctttgggccaaaactccagaagagtttgttcgcataaatagactggctctggagagtgag
tttgtttcctgccagcttcaccagtggattgacctgatttttggatataagcagcagggg
cctgaggctgttcgaagcctcaatgtcttctattacttgacctatgaaggagctgtcaat
ctgaattccatcagtgacctggtactaagagaggcggttgaagctcaaattcgtagcttt
ggtcaaactccttctcaacttttaatagagccacatcctcccagaagctctgccatgcaa
gtgactcctctgatgttcacagaccagatgcagcaggatgtcatcatggtactcaagttc
ccatctaactccccagtcacccacgttgctgccaacactcagctgggcttggctgtacct
gccattatcacagtaactgctagcaggctgtttgctgtgaacaagtggcataatgttacc
gggcttcatggagctatgcaggaacagccataccagctgccagttgaaatcgatcctctg
atagctaataacactggaatgcacagaaggcaaattactgacctcttggatcaaagcatt
caggtcaattcccagtgcttcgtgatcactgctgataaccgcttcattctggtatgtggc
ttctgggataagagtttccgtgtttactccactgaaacaggtaaactctcgcaagttatt
ttcggacactgggacgttgtaacctgtttagccagatctgaatcatacattggaggggac
tgttatattctgtcagggtcacgtgatgcaacactgcttctctggtactggaatgggaaa
aaacacagtgttggagaataccctaacaatgaatatgctgctcctcgggctatcctaacc
ggccatgactgtgagattagctgtgctgcaatatgtgcagaactcggtctggtcatcagt
ggttcaaaagagggtccatgcctaatccatacaatgaatggagaccttctgaaggctctt
gagaaccctgaaaactacttgcatcctcgattaatccagttgtccactgaaggccactgc
attatttactacgaaaagggccagttttgtgtcttcagtgtgaatggaaagctgctgagc
aagatggagacagaagattctgtgaaggctatgctactgagtcgtgacgggcaatacctc
attgctggtggagatagtggaattgtggctgtttggcaggtatgggacctcaaacaactg
atgacttatccaggatgtgatgctggtattagggccatggccatgtctcatgaccaaagg
gtcatcattactggaatggcatctggaagtatagtactgttttacatcgattttaatcga
tggcatcatgagtatcaaaccaggtactaa
DBGET
integrated database retrieval system
