Hemiscyllium ocellatum (epaulette shark): 132817172
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Entry
132817172 CDS
T09720
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132817172 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132817172 (hspd1)
03110 Chaperones and folding catalysts [BR:
hoc03110
]
132817172 (hspd1)
03029 Mitochondrial biogenesis [BR:
hoc03029
]
132817172 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hoc04147
]
132817172 (hspd1)
Enzymes [BR:
hoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
132817172 (hspd1)
Messenger RNA biogenesis [BR:
hoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
132817172 (hspd1)
Chaperones and folding catalysts [BR:
hoc03110
]
Heat shock proteins
HSP60 / Chaperonin
132817172 (hspd1)
Mitochondrial biogenesis [BR:
hoc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
132817172 (hspd1)
Exosome [BR:
hoc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132817172 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
132817172 (hspd1)
Exosomal proteins of breast cancer cells
132817172 (hspd1)
Exosomal proteins of colorectal cancer cells
132817172 (hspd1)
Exosomal proteins of bladder cancer cells
132817172 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
132817172
NCBI-ProteinID:
XP_060683389
LinkDB
All DBs
Position
7:complement(84680782..84696526)
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AA seq
574 aa
AA seq
DB search
MLRLPTVLRQVRPVSRLLAPHLTRAYAKDVKFGSEARAMMLKGVDLLADAVAVTMGPKGR
TVILEQSWGSPKVTKDGVTVAKAIDLKDKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFEKISKGANPVEIRRGVMLAVDTVIGELKKMSKPVTTPEEIAQVATISANGDK
EIGELISDAMKKVGRNGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISNVQSIVPALEIANAHRKPVVIVAEDIDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGTVFGDEALGLNVEDIQAHDFGKVGEVVVTKDDTMLLKG
KGDKSAIEQRIQEITETLEVTTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVVGGGCALLRCIPALGDLRPVNEDQKVGIDIVSKALKVPAITIV
KNAGVEGSLIVEKILQSPPEIGYDAMAGEFVKMVEKGIIDPTKVVRTALLDAAGVASLLA
TAETVVTELPKEDKAQGMGGMGGMGGAGMGGDMF
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgctacgtttgccaactgttctgcgccaggtaagacctgtatcccgtctacttgcacct
catctcacacgggcttatgccaaagatgtgaaattcggatccgaagctcgggctatgatg
ctgaaaggggttgatcttctagccgatgctgtggctgtaaccatgggaccaaagggccga
acagttattctggaacagagttgggggagtcctaaagtgacaaaagatggagtaacagta
gctaaagcaatagatttaaaagataagtaccaaaatattggtgctaagctagtacaagat
gttgccaacaatacaaatgaagaggcaggtgatggaaccaccacagcaactgttcttgca
agagccattgccaaagagggatttgaaaagatcagtaaaggagctaatccagtggagata
agacgaggtgtaatgttggctgtagatacagtaattggtgagctgaagaagatgtctaaa
ccagtcacaacccctgaagaaattgctcaggtggcaactatttcagccaatggagataaa
gaaattggtgagctcatttctgatgcaatgaaaaaggttggccggaatggtgtcatcaca
gtcaaggatggcaaaacactccatgatgagcttgaaattattgaaggaatgaagtttgat
agaggttacatctcaccatacttcatcaacacggctaaaggtcagaaatgtgaattccag
gatgcttaccttctgcttagtgaaaagaaaatttcaaatgtacagtccattgtacctgcc
ttagagattgccaatgcacaccgcaaacctgtagttattgttgctgaagatatcgatgga
gaagcactcagcaccttggttttgaatagattgaaggttggtttacaggttgtggctgta
aaggcacctggatttggtgacaataggaagaatcaactgaaggacatggcaattgctact
ggtggtacagtatttggagatgaggcccttggactgaatgtagaggatatccaggcccat
gactttggtaaagttggtgaagttgtagttaccaaagatgacaccatgctgttgaaaggc
aagggtgacaagagtgccattgaacagcgcatccaagaaatcacagaaactttagaagtt
acaacaagtgattatgagaaggaaaaactaaatgaaaggctggccaaattatctgatggt
gtggcagtactaaagattggtggtacaagtgacgtggaggtgaatgagaagaaagacaga
gtgactgatgcacttaatgctactcgagctgctgtggaggagggtattgttgttggtggt
ggatgtgctctactgcggtgcattccagcattgggtgatctccggccagtaaatgaagac
caaaaagttggaattgacattgtcagcaaagctctcaaagtacctgctattacaatagtc
aaaaatgctggggttgaaggaagcttgattgtggagaagatactacagagtccaccagag
attggctatgatgcaatggctggggaatttgtaaagatggtagaaaaaggaataattgat
cccacaaaggttgtgaggactgccttgctggatgcagctggtgtggcatctctcttagca
acagcagaaactgtagtcacagaacttccaaaggaggataaagcacaaggaatggggggt
atgggtggcatgggtggtgcaggtatgggtggtgatatgttttaa
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