Hemiscyllium ocellatum (epaulette shark): 132817212
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Entry
132817212 CDS
T09720
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132817212 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132817212 (vps8)
Membrane trafficking [BR:
hoc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132817212 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Clathrin
TPR_VPS8_2
zf-RING_Vps41
zf-RING_11
WD40_CDC20-Fz
TPR_Vps41
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3H2C3
EIF3I
WDR55
zf-rbx1
PHD_4
zf-C3HC4
PHD
Motif
Other DBs
NCBI-GeneID:
132817212
NCBI-ProteinID:
XP_060683490
LinkDB
All DBs
Position
7:complement(92717110..93260339)
Genome browser
AA seq
1407 aa
AA seq
DB search
MSESPDTRSLTSASSQLNLTEAEGIDDKEFDIPQVDTPPTLESILNETEDEDESFILEDP
ALLNMDSIDTHSGETSSLASSDSGDRTNLKRRKKISDASSGIHGSVVRRSVLKGVSAQVV
SAADRVDAGLPTAVVVSNVIAVGTSHGLALVFDPNQALRLCLGSTAVGAQYGAVSALSIN
SDCTRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHLKFTDDPTTAICNDSGGSV
FELAFKRVMGVRTCESRCLFSGAKGEVCCIEPLLVKAELRDHPITQYALLAMASLTKVLV
IGLKPALKVWLTFPYGRTNPASVPLLSWQFVAVQSAVTPMLAFCRGDAIHFLLVKKDESG
AIHVSKQKQLHLHYDLINLTWINSRTLALLDSAEKLHVVDRHSQEELEIVDIAEVQLVYN
SSHFKSLATGGNVSQALDKTDGHFTQSLALVGEKACYQSVSGYGGQIIYLGTKSVHVITL
RTWRERVDYLLKQERFIEALSLAWSFHEGKAKAVVGLFGDQSKRKGVVADRMAEILLQYA
DRALKRCPEQGKLQVMEQHFEDMVPVMVDYCLLLERIDLLFGQIYTKLSEISVAKGVFLE
CLEPYILNDKLPSITPQVMKDLLIHFQDRDMMENIEACIVHMDITSLDIQQVVQMCWEHC
LYDAMIYVYNRGMNDYITPMEKLFQVIGPPLRAGKPLTDEQVVMGNKILVYISCCLAGRA
YPLGNVPEDLVPLVKHQVFEFLIRLHSTEVASDEELYPQIRTLLHFDTREFLNVLALTFE
DFRNDKQAVEHQQRIVDILLTVMVENSDFTPSQVGCLFTFLARQLAKPDNTLFVNRMLFD
QVLEFLCSPDDESRHAERQQVLLELLQAGGIVQFDENRLITMAEKAAFYQVCEFMYEKKQ
LYDKIISCYLNDQVRKEEIFSYIHNILSIPGYSSEEKNSVWNKTMEHAKELVTINPAKAG
ELFAMHFFTELRVILDQLEDHYLVFQLLQGLLDSSDGVQVNRELQQLNPDIHEQYLDLLC
QYSPHRVTDFLKLSEYYRLEEAIQITEKHRLHEASAYLLEKKGDVHAAFFVLLEILKNKL
SLFTDGTREKNEEMVQAAESALEETIALCQRNSHSLNQQQREALWFPLLEAVMSAQKLLK
VGSSTHYFEFLKHLTKQVLNSMTGFIALPSILQRILQDPMYAKGKLGEIQTLILGMLDTF
NYEQTLLETTTKLLNHDLHWSLCNLRGAVSKGLNPKQEHCSVCLQQYKRKQEGTEEVIIF
SCGHIYHSQCLQSKDCGIRTEGQTRWTCYKCNSSNKGARHRDFGVELNKNRSTSLAQIKV
TSAYYANSRNSDSKKPTEAALEPQQIQAFDQLRRLYRGPSRLAILTELSRNRSSDKHGLF
HPGSVANSVFQNENFQLRLSPPPVIED
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtcacccgacacccgcagcctgacctcggcatcctcgcagctcaacctgacc
gaggcggaggggattgatgataaggagtttgatattccccaagtcgatactccacctact
ctagaaagtatactgaatgagacggaagatgaagatgaatcatttattttggaggatcca
gccctcttgaatatggatagcattgatacgcattcgggtgaaacttcatctcttgctagt
tcagatagtggagacagaacaaatttaaagcgaaggaaaaaaatttcagacgctagctca
ggcattcatggttcagttgtacggcgatcagtccttaaaggggtttctgcacaagttgtg
tctgcagcagatagagtagatgctggattgcccactgctgttgttgtatcaaatgtaata
gcagtgggaacatcacatggactggcacttgtatttgatccaaatcaggcgctgcggttg
tgcctgggaagtacagcagtcggggctcagtatggagcggtgtctgcgcttagtatcaac
agtgactgcactcgactcctctgcgggtttgctaaaggacagattactatgtgggatctg
gcaaatgggaagttgctgagaacaattactgatgctcatcctccaggaactgctatcctg
cacttaaagtttactgacgatccaactacagctatttgcaatgatagtggaggctccgtg
tttgagctggccttcaagagagtaatgggagtgagaacatgtgagtcccgctgtttgttt
agtggagcaaaaggtgaagtttgctgtattgagcctttactcgtaaaggcagagctgaga
gatcatccgattacacagtatgcactactggcaatggcgtctttaaccaaggttttggtc
attggattgaaacctgcattgaaagtttggctaacatttccatatggaaggacaaatcca
gcaagtgttccacttctctcttggcagtttgttgcagtgcaaagtgcagttacaccaatg
ctggccttctgtcgaggggatgctattcatttccttttggtgaagaaagatgaatctggg
gctatacatgtgagcaaacagaaacagctgcacctccactatgatctcatcaatttaacg
tggattaattctcgtacattggctctactggatagtgcagagaagctccatgtggtggac
cgtcatagtcaagaagagctggagatcgtagacattgctgaagttcaattggtttacaac
agtagccacttcaaatccttagccactggtggaaatgttagccaagctttggataaaacg
gatgggcatttcacacagtcactggctctggttggagaaaaggcatgctaccagtcagtc
agtggctatggaggacaaattatctatctgggaaccaagtcagtgcatgtgattactctg
aggacttggcgggagagggtggattacttgctgaagcaggagcgattcattgaggcacta
tctctggcctggtcctttcatgaaggaaaagcaaaagcagtggttggtttgtttggagat
cagagtaagcggaagggtgttgtggctgatcggatggcagaaatcctacttcagtatgct
gaccgagctctgaagaggtgccctgagcaaggcaagcttcaggttatggagcaacatttt
gaggacatggtacctgtcatggttgattattgtctcttgctcgaacgcatagatcttcta
tttggacagatctacactaaattgagtgagatctcagtggcgaaaggagtatttcttgag
tgcctggaaccttatattctgaatgataagctgccaagcatcacaccacaggtaatgaag
gatctactcatccactttcaggacagggacatgatggaaaacattgaagcatgcattgta
catatggacatcactagcctggacattcaacaggtggtccaaatgtgctgggaacactgt
ctatatgatgccatgatctatgtgtacaacagaggaatgaatgattacatcactccaatg
gagaaattgttccaagttattggtcctcctctccgagctgggaaacccctcacagatgag
caagttgtcatgggtaataaaatactggtatacataagctgctgccttgctggacgtgct
tacccactcggtaatgttccagaagatcttgtcccattagtgaagcatcaggtctttgaa
tttctgattcgcttgcattccactgaagtagcttctgatgaagagttgtatcctcagatt
cgaacactgcttcactttgacactcgagaattcctcaatgtattggcactgacgtttgaa
gacttcagaaatgataaacaagcagtagaacatcagcagaggattgtggatatcttgctc
acagttatggtggagaattcagatttcactccatcacaggttgggtgtcttttcaccttc
ctggcacgacagctggcaaaaccagacaacacactttttgtcaataggatgctttttgac
caggttcttgaattcctgtgtagtcctgatgatgaatctcgacacgctgagaggcaacag
gtccttctggagttgcttcaagctgggggaattgtacagtttgatgagaacagactgatc
actatggctgagaaggctgcattctatcaagtttgcgaattcatgtatgagaagaaacag
ctgtatgataagatcatctcctgttacctgaatgatcaagttaggaaggaggaaattttc
agttacatccataatattttgtcgatacctggatacagtagtgaagagaagaactctgtg
tggaataaaaccatggaacacgctaaggagttggtgaccatcaatcctgcaaaggcaggt
gaactgtttgcgatgcatttctttacagaactcagagtgattttggaccaattagaggat
cattacttagtgtttcagttgttacaaggtctactggattcttcagatggagtgcaggtg
aatcgagagcttcagcaactgaatcctgacatccacgaacagtaccttgacctgctttgt
caatatagtccacatcgggtgacagatttcctcaagttgtcagaatactacagactcgaa
gaagccattcagattacagagaagcatagacttcatgaagcctcggcctacttactggag
aagaagggagatgtgcatgctgccttttttgtcctgcttgagatcttgaaaaacaagctc
tcgttgtttactgatggcacaagagaaaagaatgaagaaatggtgcaagctgcagaatct
gctttagaggagacgattgcattatgccaacgcaattcgcacagtctcaaccaacagcag
cgggaggcattatggtttccattgctggaagctgttatgtcagctcagaaactgttgaaa
gttggatcatccacccattactttgaatttctgaagcacttgacaaaacaagtactgaac
agcatgacaggatttatcgcacttccatcaattttacaacgaatattacaggatccaatg
tatgcaaaaggaaaactgggagagattcaaacactcatacttggaatgttagacaccttc
aattacgagcaaacattgctagaaaccacaaccaaactcctgaaccatgacctccattgg
tcactgtgcaacctgcgtggagctgttagcaagggtttgaatcctaaacaggaacattgc
agtgtctgcctgcagcagtataaaaggaaacaagaaggcactgaagaagtcatcattttt
agctgtggccatatctaccattctcaatgtcttcagagtaaagactgcggcattcgcacc
gaaggacagacgaggtggacctgctacaagtgtaactctagtaacaaaggggccagacac
cgagattttggagtagagctgaacaagaaccgaagcacttctctggcacagattaaagta
acgtctgcctactatgcaaacagcagaaactctgacagcaagaagccaacagaggcagca
ctggaaccacagcagatccaagcttttgaccagctccggcgcctctacagaggcccatct
aggttggcaattctcacagaactttctcgtaaccgaagcagtgacaagcatggcctattc
catcctggatcagtggcaaacagcgttttccaaaatgaaaacttccaactgcgtttgtca
ccgcctccagtcattgaggactag
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integrated database retrieval system
