Hemiscyllium ocellatum (epaulette shark): 132817360
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Entry
132817360 CDS
T09720
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
132817360 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132817360 (xrcc5)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
132817360 (xrcc5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
TC1
Motif
Other DBs
NCBI-GeneID:
132817360
NCBI-ProteinID:
XP_060683752
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Position
7:60579..404675
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AA seq
733 aa
AA seq
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MTRSFCWFWKMARASKSAVVLCWDVGCTTNNMALDEDSAFEQAKKVVLMFVQRQVFAESK
DETALVLFGTDRTFNPLATSDQYQNIVVQRNLMIPDFDFLEDIQNGIKTGHHQADFLDAL
IVCMDLLQKQTMGKKYDKLHIAVFTDLNSPFSSDQFDAIISSMKKFGITLQFFLPFPLNS
SSSTGDGGDAAERQWKTSPRKELTAQQKEGMRMVKKVMLSLDEVGGLDEIFTFRESVERL
SIFKKIERKPMAWPCQLTIGSGITINIVGYKAMTEEKVKKSWMSVDAKTLRKEDVRRETV
YCLNDDNETEVSKEDTIQGFRYGSDIIPFSQVDQEQMKYKTDGKCFSVLGFTKSAQVLHH
YFVGRQVLQVFAAKDDEHAAVALSALIHALQELDMMAIVRYIYDRRSNPQVGVAFPMIKE
KYECLVYIQLPFMEDLRQFTFTSLKNSKRGTASEEQLSAVDALIDSMSLVVDDGEEIEDL
FKVSKIPNPHFQRLFQCLHFKAFQPDKPLPPIDPHLKAMLDRPQELNASYKPSMEQLKKL
FTLQDSGKKKEQKIAQQIFKDNDTEEVASKRGRTDEDFNIVTLAEGNVTAVGSLTPAKDF
QTLVRQKNSNFREVTNQLMERVYQFLEVKNREYYMKSMDCIKICREEAGKAGESKFFNML
LKTLKANVEAKGLQDFWELIVQDSITLITKDEAADSTVNNDEAKQFLAAEEKPMETSAVP
EDDGDVDDLLDMM
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgatcgttctgttggttctggaagatggcgcgagcgagtaagagtgctgtagtc
ttgtgctgggatgtgggctgcacaacaaacaacatggctctggatgaggatagtgcattt
gaacaagcaaagaaagttgtgctgatgtttgttcaacgtcaggtatttgctgagagtaaa
gatgagactgctttagtcctatttgggactgatcgaacctttaacccccttgctacatca
gaccaataccagaacattgttgtccaaagaaacctgatgattcctgactttgatttcctg
gaagacatccagaacggcatcaagacaggtcaccatcaagctgattttctggatgccctg
attgtctgcatggacttgcttcaaaaacaaaccatgggaaagaagtatgacaagttacat
attgcagtattcaccgatctgaacagtcctttcagttccgaccagtttgatgccataata
agtagcatgaagaaatttggaatcacactgcagttcttcttgccattcccgctgaacagc
tcctccagcactggagatggtggagatgccgcagaaagacagtggaaaacgtcaccaagg
aaagagctcactgcacaacagaaagagggaatgcgaatggtcaagaaggtgatgctgtcc
ttggatgaagtgggtggtttagatgaaatcttcactttcagagaaagtgtggaacggcta
tccatatttaagaaaatcgaaaggaagcccatggcgtggccatgtcagctcaccatcggc
tctggaataaccatcaacatcgtgggctacaaggcaatgactgaagagaaggtaaagaaa
agctggatgtctgttgatgccaagactctgcggaaggaggatgtgaggagggagaccgtt
tactgcttaaatgatgacaatgagactgaagtttcaaaggaagacactattcaaggtttt
cgctatggtagtgatattatcccattttcacaagtagatcaggaacagatgaagtacaaa
acagatgggaaatgcttcagtgttcttggatttaccaaatctgcacaggttctgcatcat
tattttgtcggacggcaggtgctgcaggtgtttgctgcaaaggatgatgagcatgctgct
gtggcactatctgcattgatccatgcattgcaagagctggatatgatggcgatagtccgt
tacatttatgaccggagatcaaacccacaagttggagtggcttttcctatgattaaagaa
aaatatgagtgtttggtttacatccaacttccattcatggaggatctccgacaatttact
ttcacttctctgaagaacagtaagagaggaacagcttcagaagaacagttatcagccgtg
gatgctctgattgactctatgagtttggtggtggatgatggtgaagaaatagaggatctc
ttcaaagtcagtaaaattcccaatccgcattttcagcggttgtttcagtgtcttcatttc
aaagcatttcaaccagataaaccactgcctcccatagatcctcatttgaaggcaatgttg
gacaggccccaggaactgaatgcttcctacaaaccatctatggagcaattaaagaagctt
ttcactctgcaagactcaggcaaaaagaaggaacaaaagattgcacagcagattttcaaa
gacaacgatacagaagaagtggcgtcaaagagaggaaggactgatgaggatttcaatatt
gttacactggctgagggaaatgtgactgctgttggcagcctcactccagcaaaggacttc
cagactctggtccgtcaaaaaaattcaaacttcagagaagtaaccaatcagctgatggaa
cgtgtctaccagttcctggaagtcaagaaccgagagtattacatgaaaagcatggattgt
atcaaaatctgcagggaagaggctggcaaggctggagaatccaaattcttcaacatgtta
ctgaaaacccttaaagctaatgtggaggcaaagggactacaagacttctgggaattgatt
gtgcaagactctattactcttatcacaaaggatgaagctgcagacagcacagtgaataat
gatgaagccaaacagttcctagcagctgaggagaaacccatggaaacatcagcggtgcct
gaggatgacggagatgttgatgatctgcttgacatgatgtaa
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