| Entry |
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| Symbol |
bard1
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| Name |
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
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| KO |
| K10683 | BRCA1-associated RING domain protein 1 |
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| Organism |
hoc Hemiscyllium ocellatum (epaulette shark)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:hoc00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132817594 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:hoc03019]
132817594 (bard1)
04121 Ubiquitin system [BR:hoc04121]
132817594 (bard1)
03036 Chromosome and associated proteins [BR:hoc03036]
132817594 (bard1)
03400 DNA repair and recombination proteins [BR:hoc03400]
132817594 (bard1)
Messenger RNA biogenesis [BR:hoc03019]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
132817594 (bard1)
Ubiquitin system [BR:hoc04121]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
132817594 (bard1)
Chromosome and associated proteins [BR:hoc03036]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
132817594 (bard1)
DNA repair and recombination proteins [BR:hoc03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
132817594 (bard1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
7:108361727..108538431
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| AA seq |
789 aa
MSGPHRGQSWAHTAGALAALEGLLQCSACCKLLQEPVCLGGCEHVFCRVCVADSLGTNCP
VCHTPTWVKDLQPNRQLHNIADLCSQLRVLLNVRDSPGAKCNLTGSVIRPENVTGKKWEM
RTWFSPRSRKMRCVLDMNASRKNQKVASSSGFNGSSSSVFEFMSSPSPPLNSPKKKAPVN
SKQRVRKRLADANKGWGFGKRRSKKMERGNDSPENIDYHRVVSFCSQSVVLSSQGQTVAG
ETAEESLAVPQDDNVIDSSAESLTKNVIENSSEACCTPTVSSCKNISLGQTFNQGGDIFS
LVPIPATHTNAKRSRKSSDSRNLTLAKKSRKEVQNSCFEKSSAIVCEQAKLDTQQEFSAT
PARQTELSGSINQTQAPSSTENNCGTPSSRYNAQGKQCATPKSPQTPQATFRSQLPGSCA
MTPISPVTPTMKRNHKGETPLHIAAIKGDIAAVEQLLENGANPNIKDNAGWTPLHEACNH
GHLEIVERLLKFGVLLNTPGYQNDSPLHDAVRNGHVDVVKLLILHRASQDVINIFGLRPV
DYANSEEMIAALHHSPKNEDPVAEHCFAVTSNQRRDGPIVLLGSDLLGAKKKKLDKLVKL
LKAGNCTEFNTSVTHIIVPNDQALSTMKCLMGIVSGCWLVNFEWVTACLEKNDRVAEEDY
EINIVNGPERGRRNQEQQLPKLFDGCHFYFMGPFKSCKKEDLVNLVKVGGGQVLARQPKP
DSDVTQSINTVAYHASPGSDQSFCTQYIISDKDSNYKPERVRLGKVWTTHCTWLIDCVKA
FELLPITEH |
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| NT seq |
2370 nt +upstreamnt +downstreamnt
atgtcggggccacatcgcggacagagttgggctcacacagcgggggccctggccgcactc
gaggggctgctgcagtgctcggcctgttgcaaactgctgcaggagcctgtctgtcttgga
ggctgtgagcatgtattttgccgagtttgtgttgctgattctcttgggacaaattgtcca
gtgtgtcacactccaacctgggtaaaagacctgcagccgaacagacagctgcacaatatt
gccgacctgtgcagccagcttagagttctcctgaatgtcagagactctccaggtgccaaa
tgcaatctaactggatcagtaatcagacctgaaaatgtaactggtaaaaaatgggaaatg
agaacatggttcagtccacgcagtagaaaaatgaggtgtgtgctagatatgaatgcttcc
aggaagaatcagaaagtggcttccagttctggttttaatgggtcatcatcatctgtgttt
gaattcatgtcatcaccatctcctccactcaactctccaaagaagaaagctccggttaac
tcaaaacagagagtaaggaaaagattagctgatgccaataaaggttggggttttggaaag
agaagaagcaagaaaatggagagaggaaatgacagccctgaaaatatagattatcataga
gttgtctcattttgcagccaatcggtggtcctcagcagccaggggcaaacagttgcaggt
gagacagctgaagagtcacttgctgtgccacaggatgacaatgtaattgactccagtgca
gaatctttgaccaagaatgtgattgagaattcttctgaagcatgctgtactccaacagtc
tccagttgcaaaaatatttcccttggacaaactttcaatcagggaggagacattttttct
cttgtccccatcccagccacacacacaaatgctaaaagatcaaggaaatcatcagattca
cgcaacctgactcttgccaaaaagagcagaaaagaagtacagaattcttgctttgaaaag
tcatctgcaattgtttgtgagcaagctaagttagacacacaacaggaattttcagctact
ccagcacgtcaaactgagttaagcgggagcattaatcagacgcaagccccttcttcaaca
gaaaataactgtggtacaccatctagcagatacaatgctcaaggaaagcaatgtgcaacc
ccaaaatctcctcaaacaccacaagctacatttagaagccagttacctggaagttgtgca
atgactccaatctcacctgttactcccacaatgaaaagaaatcacaagggtgagactcca
cttcacatcgctgccataaagggtgatattgcagcagtggagcagcttttggagaacgga
gcgaatccaaacatcaaagataatgctggatggaccccattgcatgaggcatgcaaccat
ggacacttggaaattgtagagcggctgctgaaatttggcgtgctactgaatacaccagga
taccagaacgattctcccttgcatgatgctgtcaggaatggacacgtggatgttgtaaag
ctgctgatcttacaccgtgcctctcaggatgtgatcaatatctttgggctgcggcctgtt
gattatgcaaattcagaagaaatgatagctgctttacatcactcccccaaaaatgaggat
ccagttgctgagcactgctttgcagtgacttcaaaccagagaagagatggacctattgtg
ttactgggaagtgatctccttggagccaagaagaaaaaacttgacaaattagtaaagctg
ttgaaagctgggaactgcactgaatttaatacctcggtgacgcacattattgttcccaat
gatcaggctctctctaccatgaagtgtttgatggggatcgtctctggctgctggcttgtg
aattttgaatgggtgacagcttgcctggagaagaatgacagagtagctgaagaagactat
gagataaatattgtaaatggtcccgaacgtgggcgacggaaccaggagcagcagctacca
aaactatttgatggctgccacttctatttcatgggcccattcaaaagctgcaagaaggaa
gatcttgttaatttggtcaaggttggtggggggcaggtccttgcccggcagccaaaacca
gacagcgacgtgactcagagcatcaacactgtggcttaccatgcatcccctggctcggat
cagtcgttttgtacacagtatatcatctctgacaaagacagtaactataagcctgaaaga
gtgaggttaggtaaagtgtggaccacccattgtacatggctgattgactgcgtgaaagca
tttgaactgctgccgataaccgaacactaa |
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