Hemiscyllium ocellatum (epaulette shark): 132818123
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Entry
132818123 CDS
T09720
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03040
Spliceosome
hoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132818123
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132818123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hoc03041
]
132818123
Spliceosome [BR:
hoc03041
]
Common components
Common spliceosomal components
SR proteins
132818123
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Nup35_RRM_2
SET_assoc
Motif
Other DBs
NCBI-GeneID:
132818123
NCBI-ProteinID:
XP_060684811
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All DBs
Position
8:complement(40765478..40776270)
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AA seq
289 aa
AA seq
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MWTKHRQSSLFRMGSRVFIGRLSPHATEKNVEKFFKGYGRIKEIDLKNGFGFVEFEDYRD
ADDAVYEMDGKELCNERVTVEHARARPRGGRGGGRYQGRFSQRWSRGGGSGGRNGPPIRT
ENRVIVENLSSRVSWQDLKDFMRQAGEVTFADAHRHKLNEGIVEFACYSDLKNALDKLSG
TELNGRRIRLIEERKQYRSRSRSRSRTRSSSRSRSRSRSRSRSRDRKSYSRSKSRSRSKS
RSRSRSPAPAKESEGRSPSPSKSPVLAGRARSHSRRRTPSRSPSGESAD
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtggaccaagcataggcagagttcgttgttcagaatgggttctcgagtgttcatcggt
agactgagtcctcatgctacagagaaaaatgtggaaaagtttttcaaaggatatggaaga
attaaggaaattgatctgaagaatggctttggatttgtggagtttgaagattacagagat
gcagatgatgcagtgtatgagatggatggaaaagagttgtgcaatgaaagagttacagtt
gaacatgccagagcacgccctagaggaggacgtggagggggccgatatcaaggtcgattc
agccaacgttggtcccgtggtggtggtagtggaggcagaaatggacctccaattcgtaca
gaaaatagagtaattgttgaaaacttgtcttccagagttagctggcaggacctcaaagat
tttatgagacaggctggagaagttacctttgctgatgcacacaggcacaaactcaatgaa
gggattgtagaatttgcctgttacagtgatttgaagaatgcacttgataagctctctggc
actgagcttaatggtagaaggattcgactgattgaagaacgtaagcagtacagatctcgc
agcaggtcccgttcccgcactcgcagttcttccagatctcgcagtcgatctcgcagtcga
tctcgttccagagaccgcaagtcttacagtagatcaaagagtagaagtcgcagtaaatca
cgttctcgtagtcgatcgcctgctcctgcaaaggaatcggaaggccgctccccttcacca
tccaaatcacccgtgttggcagggcgtgcaagatcccattccaggagacggactccttca
cggtcaccatctggtgaaagtgctgactaa
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