Hemiscyllium ocellatum (epaulette shark): 132818272
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Entry
132818272 CDS
T09720
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03013
Nucleocytoplasmic transport
hoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132818272 (pnn)
03015 mRNA surveillance pathway
132818272 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132818272 (pnn)
03041 Spliceosome [BR:
hoc03041
]
132818272 (pnn)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132818272 (pnn)
Spliceosome [BR:
hoc03041
]
Complex C
Other components
EJC/TREX
132818272 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
132818272
NCBI-ProteinID:
XP_060685081
LinkDB
All DBs
Position
8:complement(59795917..59819074)
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AA seq
646 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKNVDENIRKLTGRDPNDLRPGQARRLSIAGPGGGRGRGLGL
LRRGLSDSGGGPPAKQRDLDGALSRLGDRRSRRESRQDSDAEDDEDTKKPALQSSVVATS
KERTRRDLIQDQTMDEKGKERNRRMFGLLMGTLQKFKQESNVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQDVWNEHNLKIIKYIRTKTKPH
LFYIPGKHCPATQKLLDESQRKMNGIFEHRRLEFADQINRMEVRPRRQSLKEKEQREVQK
EEQQNEEQEGKVAHHEEVEVLGNQNNDVEMEAAEEEVEVVAVKSVEKQQDKEQEVEAEEE
EVEEGENNSQPESMPVDDKEVSQNVENDQDMVEEVDECREDRVEEVSKEPEPEPESVPEP
EPEPELEPEPEPKPVPELKYKLESEPKPEPELECSVENEPAQSPVNTQPVDLQVEPVRVS
PRKSTSRSKSSSRSKSRGREKTKSKSRSRSSSSTSSSSSSSTSSSGSSSSSGSSSRSSSS
TSSSSGSSSRDSSSSTSSSSESQSRSRSRGHSRDRKRRRSSDRKRRVTSNADKDRKSSKP
SSKDLKGSREKGSRLDRKRSITESHSGKRSSRTERDHKLDRKDKKH
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgagaagtttgcaggatcaactggagaaagcgaaggaaagtttgaag
aatgtggacgagaacattcggaagctgactggccgggacccgaatgacctcaggcccggc
caagctaggcggctatccatcgcaggtcctggtggaggtaggggacgtggtcttggatta
ctgagacgtggactctctgacagcggaggaggtcccccagctaaacagcgagatttagat
ggggcactcagcaggctgggagatcgtcgatctaggagagagtcacgtcaagacagcgac
gcagaggatgatgaagatacaaaaaaaccagcgttgcagtcttctgttgttgctacctcc
aaagaaagaacacgccgagaccttattcaagatcaaacaatggatgaaaagggcaaagaa
aggaatcggcggatgtttggcctgttgatgggtacactgcaaaaattcaaacaggaatct
aatgttgcaactgagaggcaaaaaagacgtcaggaaatagagcagaaacttgaagtgcaa
gctgaagaagaacgtaaacaagtagaaaatgaaaggagagaattatttgaggagcgtcgt
gctaaacaaactgagctaagacttctagaacaaaaagtggaactggcccagttgcaagat
gtatggaatgaacataatttaaaaataatcaagtacatcagaaccaagacaaaacctcat
ttattttatatacctggtaaacattgtccagctactcaaaagcttttggatgaatcccaa
aggaagatgaatggtatttttgaacacaggcgtctggagtttgcagatcaaattaacaga
atggaagttagacctagacgtcagtcactgaaggaaaaagaacagcgagaggtgcagaag
gaagagcaacaaaacgaggaacaggagggtaaggtggctcaccatgaagaggtggaggtt
ttgggtaaccagaataatgatgtagaaatggaggcagcagaagaggaagttgaagtagtt
gcagttaaaagtgtagagaaacagcaggacaaggagcaagaagtggaggctgaggaggag
gaggtagaggagggggaaaacaacagccagccagagagtatgcctgttgatgataaggaa
gtaagccaaaatgtagagaacgatcaggatatggtggaggaagtagatgagtgtagggag
gacagagtagaagaggtttctaaggaacctgaacctgaacctgagtctgtgcctgagcca
gaaccagaacctgagttggagccagaacctgaacccaagccagtacctgagttgaaatac
aaactggaatccgaacccaagcctgaacctgagcttgaatgttcggttgagaatgaacca
gcacaaagtcctgtaaacactcagccagtggatttacaagtggaaccagttagggtgtca
ccaaggaaaagcacaagtaggagcaagagtagtagcaggagtaaaagcagaggtcgtgag
aagacaaagagtaaaagtcgcagtcggagtagcagtagcaccagctcgagtagtagttca
agtaccagtagcagtggcagtagctcgagcagtggtagcagcagtagaagcagttccagc
actagcagtagcagtggcagtagtagcagagatagcagcagtagcactagcagcagtagt
gagagtcaaagtagaagtcgtagtcggggtcacagcagggacagaaagcggaggaggagc
tcagatcgaaagcgtagagttacttcaaatgcagacaaagatcgtaagtcatcaaaaccc
agtagcaaagatttaaaaggatccagggaaaaagggtcacggttagataggaagagatct
ataacagaaagtcattcaggcaaaagatcttcacggactgaaagagatcataaattggac
aggaaagacaaaaaacactaa
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