Hemiscyllium ocellatum (epaulette shark): 132818425
Help
Entry
132818425 CDS
T09720
Symbol
nrde2
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132818425 (nrde2)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
132818425 (nrde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Suf
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
132818425
NCBI-ProteinID:
XP_060685444
LinkDB
All DBs
Position
8:complement(110259055..110331353)
Genome browser
AA seq
1160 aa
AA seq
DB search
MEPLSGSLFPAFGVRESRCGSASDGLDWLSNQSFRTEDALQLHHRIVGDAADTTQGSPQA
SDHSGITGGVLDQGEQDAPAKKKKKRKKHRQHRKDKRKDRAIHTGSESDPELFRDKDSET
PAERSDASAGLPQGQFMWLDDLHLQTAQTFCIDRKADPANWEYKSLYRGDLARYKRCGDV
CLGLDSRKQHIIWEDSPRPKKKARKRDDRYYSSSGLQFLSTGSVPVRCRGCVQGSIPVPG
TDSFIPVPDWAEIESESLGTVTWFNPLGIYDESTALWLQGKGREEPEKQSCLPSDSSEKI
NSVNMAKVETFNRMLREDPGNVQMWMEFVHFQDELMQDPSPYMTSAAESEKRKRSRRAVW
EKKLAILERAIESNPNNVELKVARLELGKESWEPSNLVNEWKKVVFLHPNNTTLWQRYLL
FCQSQFSTFSTSKVNGIYGKCLSTLAAALDGTLLSHPALPDTEEAMFAIFLQQCHFLRQT
GHSEKAIALFQALIDFTFFKPDSVAGLITKAQVEFFEPFWDSDEPRFGEGGARGWRVWMR
QQERGGWVVLNEKGDNEDEEEDGEEVKDKTLPKWQLWLHVESSRDSKHCLPWRADKAKGQ
TEEDCEDPDRQVLFDDIGSSMFKVSSPELRFQLMSSFFQLLGIPTGFSLPPCCLNMVLDD
PSLFDCGSADERPLSCCPTPAAGVSTIGFMPAMPNARQPVSHCPEGEDFIQTAFHQALPL
FAGKERSELALYWLQYEKSKVVRSLQLRRKKQPKSLGKRSKKLAKNLLKEGENRNNLSLW
REYAHLEWLLGNVEDSRRVFDTAIALSVSQGLQSSTLCDLCFLYSSLELESVQSISASTT
MRAVYILTSLALGITYSPYAGEVLPVNVLKARKTYERSFQDPPNDDTALTGSQRPGQLIS
LVGCFALFQYLTLGIQAADSLYRQAAERLVGLSSLEKAQAKPSVWRQSVMCALERLTVMH
VRLLRFHMQASVYPLGPVRHTLTHALGQYPGSHQLWKLYTQVESRSHDASRARRFFDATA
RSAPDLIVPRLFAIYAEERRKERVDAVQRADLGILYSTLPETGLTNRIRALFEHAVQTEA
GAHSVLLWRMYLNFTVTQGNIEKTKGVFYRALQACPWAKVLYFDAVSHLPGQLQEIIDLM
TEKEIRIRVPLEELEILMED
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggagccgctgtcgggctccttgttcccggcgttcggtgtgagggaatcccgctgtggg
agtgcctctgacggattggattggctcagtaatcaaagcttccgcactgaagatgccctg
caactgcaccatcgtatcgtgggcgatgcagcagacacaacccaggggtcaccccaggca
agtgatcattcagggataactgggggagttttggatcaaggcgaacaagatgcaccggcc
aaaaagaagaagaaaaggaagaaacatcggcagcacagaaaggataagaggaaggacaga
gcgattcacaccggcagcgaatctgatcctgaactcttccgagataaagactctgagact
cctgcagagaggtctgacgccagtgctggtcttccccagggtcaattcatgtggctggat
gacctccatctgcaaactgcacagaccttctgtatagacagaaaagctgatcctgccaac
tgggagtacaagtcactctatcggggagatttggcaaggtacaagaggtgtggggatgtc
tgccttggccttgactccagaaagcagcacattatctgggaagattcaccccgaccaaag
aaaaaggccaggaagagggatgatcgatactacagctcatcgggccttcagttcctgagc
actggctctgttcctgttcgctgtagagggtgtgtgcaaggaagcattcctgtgcctggt
acagactccttcataccagttccagactgggcagagattgaaagtgaatccttaggcact
gtcacctggttcaatccacttggaatttacgatgaatccaccgctttgtggctccaggga
aaaggccgagaggagccggagaagcaatcctgcctgccctctgatagcagtgagaagata
aactcggtaaacatggccaaagtggagacgttcaataggatgttgagagaagaccctggg
aatgtccaaatgtggatggagtttgttcattttcaggatgaattaatgcaggacccaagt
ccgtacatgacctctgcagctgagtctgagaaacggaagagatcccgaagggctgtctgg
gagaaaaagctggccattttggaacgagccattgaaagcaatcccaacaatgtggagctg
aaagtagcccggctggagctcggcaaagaatcttgggaaccatccaatctggtcaacgaa
tggaaaaaggtggtctttctgcacccaaacaacaccactctgtggcagaggtacctgctg
ttctgccagagccagttcagcaccttttcgacatccaaggtcaatggcatctatggcaag
tgcctgagcaccctggcagctgctctggatggtaccctactgtcccatcctgcactgcct
gacacagaggaagccatgtttgcaattttcctgcagcagtgtcacttcttgcgacagact
ggccactcggaaaaagccattgccctcttccaggctctcattgacttcaccttcttcaaa
cctgacagtgttgctggcctgataaccaaggcacaggtggagttctttgaaccgttctgg
gacagtgatgagccccggtttggagaaggaggggcaagaggttggagagtttggatgcga
cagcaagaaaggggcggctgggttgtcctgaatgagaaaggcgacaatgaggatgaggag
gaagatggggaggaggtcaaagacaagacactacccaagtggcagctttggctgcatgtg
gagagcagccgtgactccaagcactgtctgccatggcgagctgataaggcgaagggtcag
actgaagaagactgtgaggatcctgacagacaggtgctgtttgatgacattggttcttca
atgttcaaagtatccagcccagaactgaggttccagctcatgtcatcgtttttccagttg
ctgggaattccaacaggattcagcctgcctccgtgctgcctgaatatggtgctggatgat
cctagcttgtttgactgtggctcagctgatgagagacctctatcttgctgtcccactcca
gctgctggggtcagcaccatcggcttcatgccagcaatgcctaatgccaggcagccagtc
agccactgcccagaaggggaggacttcatacaaaccgcgtttcaccaggcgttgcccctg
ttcgctgggaaagagcggtcagagctcgccctgtactggctgcagtatgaaaaatcaaag
gtggtgaggagcctgcagctcaggagaaagaagcagccgaaatctctggggaagaggagc
aagaaactcgctaaaaaccttctgaaggagggtgaaaaccggaacaatctgtccctgtgg
agggaatacgcccatttggaatggctgctggggaatgtggaggactcgagaagggttttt
gacacggccattgctttgtctgtctctcagggcctgcagagctccaccctgtgtgacctc
tgcttcctgtactcctcactggagctggagtcagtgcagagcatcagtgcgtcaacaaca
atgcgggcggtttatatcctcactagccttgccctgggtatcacctactcaccttacgca
ggtgaggtgctgccagttaatgtgctgaaggctcgaaaaacatacgagcgatctttccag
gacccgcctaacgacgacacagctttaaccggcagccagaggcctggccagctcatcagc
ctggtaggctgcttcgccctcttccagtacctcacgctgggcattcaggctgccgactca
ctgtacaggcaggcagctgaaaggcttgtaggcctctcctcgctggaaaaggcccaggcc
aagccgagcgtgtggcgacagagtgtgatgtgtgcgttggagaggctgactgtgatgcac
gtgaggttgctgaggttccacatgcaggccagtgtgtatcccctgggccctgtccgccac
acgctcacacacgctctgggccagtatcctggcagccaccagctctggaagctctacacg
caggttgaaagccgctctcacgatgccagccgagcccgaaggttcttcgacgccaccgcc
cggtcagcgccagacctcatcgtgccgcggctgtttgccatctacgcagaagagcggaga
aaggagcgtgtcgacgctgtgcagagggcagatcttgggattttgtacagcactctccca
gaaaccggcctcaccaaccggatcagagcgctgtttgagcacgctgttcagacagaggct
ggcgcacactcggttttactttggaggatgtacctgaacttcacggtgactcaaggaaac
attgagaagacaaagggtgtattttacagagcactgcaggcgtgcccgtgggcaaaggtg
ctatacttcgatgcagtcagccacttacccggacaactccaagaaataatagacttaatg
acggaaaaggagattcggatcagagttcctctggaggagttggaaattcttatggaagat
tga
DBGET
integrated database retrieval system
