Hemiscyllium ocellatum (epaulette shark): 132818439
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Entry
132818439 CDS
T09720
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132818439 (brf1b)
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
132818439 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
132818439
NCBI-ProteinID:
XP_060685481
LinkDB
All DBs
Position
8:complement(115285416..115761187)
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AA seq
688 aa
AA seq
DB search
MSSSRVCRTCGCTDIDIDQARGDAVCTACGSVLEDNIIVSEVQFVENSGGGSSAVGQFVS
LDSAGKAPSLGTGFHTNLGKESRAQTLQNGRRQIHHLGNQLQLNQHCLDTAFNFFKMAVS
KHLTRGRKMSHVVAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAP
AIDPCLYIPRFAHMLEFGDKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARM
HDFRRTVKEVIRVVKVCESTLRKRLNEFEETPTSQLTIDEFMKIDLEEECDPPSFTAGKR
KIRLQQLEQELSKKLVDFEGEIASYQDEIETELEITRPRYRGAYANYAKGDTLDDGASVT
SSGLGEEEGEDEELTAVANHLNKDFCDDFLNEERPKENDKTEEEKESEPLPKPPNISSLL
GPLPTAASLGLKESIEECIAADEPESGVDPQKGELDLNGIDDNEIDRYLLNEKEVEMKTE
LWLRENADYLKEQKEKEERIAKEKELGIYKEQKPRKSSKKREPIRASTAGEAIEKMLEQK
KISSKINYDVLRDLNSKGSSTPTREESDSSNHGGSNSRSKKGPAHRKSAANSRGLATPVN
NLGKRLRPLISSVPSKKPAINPGPDSGPGASQVEQPVAVLVESGPVVYNEDEVEEEEEVE
EEEENCLSALQLIGGNDYGFEMEEDDGF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctcccgggtttgccgaacctgcggctgcacggacattgacattgaccaggcc
cggggcgatgcggtctgtacggcctgtggctccgtgctcgaggataacatcatcgtctcc
gaggtacagttcgtggagaacagcggcggcggctcctcggctgtcggacagttcgtctcc
ttggacagtgctggtaaagctccatcgctgggaacagggttccataccaaccttgggaag
gagtcacgtgcacagactttacagaatggtcgtcgtcagattcaccatctgggtaaccag
ctccaattaaaccagcactgccttgatactgcctttaacttcttcaaaatggcagttagc
aagcacctcaccagaggtcggaaaatgagccacgtggtcgctgcctgtctatatctggtc
tgtcgaacagaggggactcctcatatgttattggatctcagtgacctgttgcaggtgaat
gtctacgtgttgggaaagacttttcttctcctggccagagagctttgtataaatgctcca
gcaatagatccatgtttatacatcccgaggtttgcccatatgcttgagtttggagataag
aaccatgaggtttctatgacagcactccgtttattacaaaggatgaagcgggactggatg
catactggccggcggccgtctggactatgtggggcagctctcttggttgctgctagaatg
cacgatttcaggcgaactgttaaagaagtcattcgtgtggtcaaagtctgcgagtcaact
ctcaggaaaaggcttaatgaatttgaagagacaccaaccagccagttaacaatcgacgag
tttatgaagattgatttggaggaagagtgtgacccaccttcattcacagcaggaaagaga
aagattcggctgcaacagctggagcaagaactctccaaaaaattggtggattttgaaggt
gaaatcgcaagttatcaagatgagattgagacagaactggagatcactcgaccaaggtat
cgaggagcttatgctaactatgctaaaggagatactctggatgatggagcctcagtaacc
tccagtggattaggtgaggaagagggtgaggatgaagagctgacagcagtcgcaaaccat
ctcaacaaggatttctgtgatgacttcctcaatgaagagcggccaaaagagaatgataaa
acagaggaggagaaagaatcagagcctctacccaaacccccaaatatatcctctctgtta
ggccccctccctaccgcagctagccttggcctgaaggagtccattgaagagtgtatagca
gctgatgaacctgagtcaggtgttgatcctcagaaaggtgaattggacttgaatggcatc
gatgacaatgaaatcgataggtatctgctcaacgagaaggaagtggaaatgaaaactgag
ctgtggctgagagagaacgcagattacctgaaggagcaaaaggaaaaggaggaacggata
gccaaagagaaagagctcgggatttacaaagagcagaagcccagaaagtcatctaagaaa
cgcgagccaatccgagccagcaccgcaggggaagccatagaaaaaatgctagagcagaag
aagatctcgagcaagataaactacgatgtcctgagggatctgaacagcaaggggagcagc
acaccaacccgagaggaaagtgacagcagtaaccacggcggcagtaacagccgcagcaag
aagggaccagcccaccgaaagtcagccgcaaactcccgaggccttgctacacccgtcaac
aacttgggcaagagacttcggcccctgatttcttcagtaccttcgaaaaaaccagcaatt
aacccgggtcctgactccggacctggtgctagtcaggtagagcagcctgttgcagtgctg
gtcgagagtggccctgtggtttataatgaggacgaggtggaagaggaggaggaggtggaa
gaagaggaagagaactgcctcagtgcgctgcagcttatcggtggaaatgattatggcttt
gaaatggaggaggatgatggattctaa
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