Hemiscyllium ocellatum (epaulette shark): 132818632
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Entry
132818632 CDS
T09720
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04115
p53 signaling pathway
hoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132818632 (cop1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
132818632 (cop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132818632 (cop1)
Enzymes [BR:
hoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132818632 (cop1)
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132818632 (cop1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132818632 (cop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
zf-C3HC4_2
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
zf-C3HC4
zf-RING_2
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
zf-C3HC4_3
Beta-prop_DCAF4
WD40_RFWD3
zf-RING_5
RING_XB3-XBAT31
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
WD40_like
zf-C3HC4_4
zf-RING_10
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
zf-rbx1
UvrD-helicase
zf_C2H2_10
Sina_RING
Motif
Other DBs
NCBI-GeneID:
132818632
NCBI-ProteinID:
XP_060685624
LinkDB
All DBs
Position
9:21380951..21502475
Genome browser
AA seq
680 aa
AA seq
DB search
MASSRQSPSPQPGPGSSSSSSSSSSSSSSSSTAAATAAPGSSRANSRLSGAAGGARKRPL
LNGLVNSYEDKSSDFVCPICFEMIDEAHMTKCGHSFCYKCIRQSLEVSNRCPKCNYVIDN
VDQLYPNFLVNELILKQKQRSEEKRLKLEHPNGHRWQAIQDVLITDQDSLDLPNVNLMLE
LIIQKKQQLEAESQAAQLQILMEFLQEAKRNKKEQLDQLQKELNVLEEDIKRVEGLMFNE
TAGLYSPVSESTHVPNLDSTVPQFEAPSPSNSIIDSTEYSQPPGFSGSSQGKRQTWYNNT
LASRRKRLTAHFEDLEQCYFSTRLSRLSDETRSVNQLEEFQECLSKFTRYSSVRPLATLS
YANDLYNGSSIVSSIEFDRDCDFFAIAGVTKRIKVFEYGTVIQDAVDIHYPINEMTCNSK
ISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASG
SDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPI
MVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWSVNRPHCLRSFKGHINEKNFVGLASNG
DYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKEKKEDDSNEFVSAVCWRALPDGQ
ESNVLIAANSQGTIKVLELV
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttcccggcagagtccgagcccgcagcccggacccggctcgtcgtcgtcctcc
tcttcctcttcctcctcctcctcgtcctcttctaccgccgccgccaccgccgccccgggc
tccagccgcgccaacagcagattgtccggcgctgccggaggagctcggaaacggcccctg
ctcaacggcctggtcaactcgtacgaggataagagcagcgacttcgtctgtcctatctgc
tttgagatgattgatgaggcacacatgacaaaatgtgggcacagtttttgctataaatgt
attcgacagagcttggaagtcagcaaccggtgccccaagtgcaactatgtgattgataat
gttgatcaactatatcctaacttcctagtgaacgaactaatcctaaaacagaagcagaga
tctgaagaaaaacgactaaaacttgaacatccaaatggccaccgatggcaggcaattcag
gatgtgctgatcacagatcaggatagtctggatctcccgaatgtaaacctcatgctggag
ctgataatacagaagaagcagcagctggaagcggaatctcaggcagcccagttgcagatc
ttaatggagtttcttcaggaggcgaaaaggaacaagaaggagcaactggaccagttacag
aaagagctgaatgttcttgaagaagacattaaacgagtggagggactgatgtttaatgag
acggctggcctatattctcctgtcagtgaatcgactcatgtgccgaacctggatagcact
gtgccacagtttgaagcgccatctccttcgaacagcattatagattctacagaatattct
cagcctcccggctttagtggaagttcgcagggaaaaaggcaaacctggtacaacaacaca
ttggcctctcggcgcaagcgattaactgctcactttgaagatcttgagcagtgctatttc
tcaaccaggttatctcgcttgtcagatgaaacaagatcagtaaatcaactggaggaattt
caggagtgcctttccaagtttacacggtacagctctgtgaggcctctggccacgctctca
tatgccaatgatttatacaacggctcgagtattgtttccagcattgaatttgacagagat
tgtgacttctttgccatcgctggtgtgacgaagcggatcaaagtgtttgagtatggaacc
gtgatccaggatgctgtggacattcactacccaatcaacgaaatgacttgcaactccaaa
atcagctgtatcagctggagcagttaccacaagaacctgttagcaagcagtgactatgaa
ggaacagtcattctgtgggatggattcacagggcagagatctaaagtctaccaggaacat
gagaaacgatgttggagtgtagattttaatctgatggatcccaaactcctggcttcaggt
tctgatgatgctaaagtgaagttgtggtctacaaatcttgacaattctgtggcaagcatt
gaagcaaaagcaaatgtttgctgtgtcaagttcagccccagctccaggtaccatctggcc
tttggctgtgcagatcactgtgttcactattatgatctgcggaacactaaacagcctatc
atggtgtttaaaggacatcgcaaggcagtatcctatgccaagtttgtaagtggagaagaa
atagtttcagcatctacagacagccagttgaagctctggagtgttaacagaccgcactgt
ttacggtcatttaagggtcacatcaacgaaaagaactttgtgggtttggcatccaatggg
gattacattgcctgtggaagtgaaaacaattctctctacctctactataaggggctctca
aaaacactgctcaccttcaagtttgacacagttaaaagtgtcttggacaaggagaaaaag
gaggatgacagcaatgaatttgtcagtgcggtgtgctggagagcgttaccggatgggcag
gaatcgaatgtcctaatagcagcgaacagccaaggcacaataaaggtcctggaactcgtc
tga
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