Hemiscyllium ocellatum (epaulette shark): 132818665
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Entry
132818665 CDS
T09720
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor, RNA polymerase I, subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132818665 (taf1c)
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
132818665 (taf1c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
DUF5824
Motif
Other DBs
NCBI-GeneID:
132818665
NCBI-ProteinID:
XP_060685673
LinkDB
All DBs
Position
1:62269790..62322287
Genome browser
AA seq
981 aa
AA seq
DB search
MESAFPYSLYPSFYNPGPSVRNPREPGGWGQYEHAQPFCAESGDQQETELKWSALKSLKQ
ENWEPLEPIALPLLPAKTVCKFRPASLEDLTYTGRLMTTGERNEMTMGALNFTEQMANFF
LDHRNDAFSSMGKLLEENFYFGEYPLRGKARQTAISVNHLRAFTEQVKQKECPLSCRSMQ
ARLLNMLLRECIFDIPPSLLAENIHEEMKIQRNKLLFDQSATGGALVYCPFSKEACLEEG
CLIYPGSESMSILNFRKIKLGLDEYKMPKLNVKFKPVKFKLNGRIHQIDSSAVEEEVFIG
VRSDYHCGAWKLSQDVNPSILQVVQVDNIATCINVSPHVPGELVIASECGTAYLWTLDKG
LQKIRKEVDNLYFNAQLPWRWCDFTAHPRVYTYADRTGLDLTDVRAGKTCDQTLFKIGAT
ANCQKGERVILPKHLQDVNPYHYLVTTQYSAYIVDERFPTVPVLKWAHMLKSPPMFAQVA
CGAAKKRANKIVLGTQRTQEVLLLQYSGGSQLPCKSLGPPLKLSSIYDMMQHLPVKLPRQ
HEAVVERLHSPGAGLATLYHCCGKKSLSVIQLSAVGDLFYQMLIRKNSSTSRKTSRVRVG
CDHEPNNSILTERVQSSNHSTDGRDERAEDLAQGETERPEGSSSRSGGDEQSFQCTNKPL
KPSCTALATCSRWVNSFLKKQKNFQSASNMLHKRTGISSKRLFSCKTFKKGEESTDTCRE
LWDKMSAVMEKQQVLCHSTFPILDPVSVPDVVDASNWRDELSERLTAAWEGKWSQWWEEK
LGMYRDRKIQALRAKRRREKLAQTRQRKALSGSFTSSVSGLSDFSDFSSWSTFSGINSEH
SDYLSGTESNVTSNKSAETNQSIRAVAEESRREMEAESSAAVVEQSQAPVPIFSQEMQLV
SIPNERKRILQNYLAALEDHSFQPPQEGDEPSMPLSLTSSIQMSFPEPSQVASSYEVPWR
PSSQSQLGSSQPKKKRAKMGF
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgctttcccctactccctgtatcccagcttctacaatcccggcccctccgtc
aggaaccctcgggagccgggtggctgggggcagtatgaacatgcccagccgttctgtgcg
gagagcggggaccaacaggaaactgaattaaaatggtcagctctgaaaagtctgaagcaa
gagaattgggagccattggaacccattgcacttccacttcttccagccaaaacagtttgc
aagtttcggccagcaagcctggaagatctaacttatactgggaggctaatgacaactgga
gaaaggaatgaaatgacaatgggtgcacttaatttcacggaacagatggctaatttcttt
cttgatcaccgtaatgatgccttcagttcaatgggcaaacttctagaggagaacttctat
tttggagaatatcccctcaggggaaaagcaagacagaccgcaataagtgtaaaccatctg
agggcgttcacagagcaagtaaagcaaaaagagtgcccactttcttgtagaagtatgcaa
gcaagacttttaaatatgttgttgcgggagtgtatttttgatattccaccaagcttgttg
gcagaaaacattcatgaagaaatgaagattcaaagaaacaaacttctgtttgatcagtct
gccactggtggtgctctggtatactgtcctttctccaaagaagcctgtttagaagaagga
tgcctgatctatcctggcagcgagtccatgagcatactgaactttcgcaaaatcaagttg
ggtcttgatgaatataaaatgcccaaattgaatgtgaaatttaaaccagtgaaatttaaa
ttaaatggtagaatccatcaaatagattccagtgctgttgaagaagaagtttttataggg
gttcggtctgactatcattgcggagcatggaaactttcccaggatgtgaatccatctatt
ctgcaggtagttcaggtggataatattgctacttgcatcaatgtcagtcctcatgttcct
ggagagctggtgattgccagtgagtgtggaactgcgtacctctggactttagacaaaggc
cttcagaaaattcgaaaggaagtggataacctctactttaatgcccagttgccttggaga
tggtgcgatttcacggctcacccacgagtttatacgtatgctgacagaaccggccttgac
ctaactgatgtgagggctggcaaaacctgtgaccaaaccttgtttaagataggagcgact
gctaactgtcaaaaaggtgaacgtgtaattcttcccaaacatctgcaagatgtaaatcca
tatcattatcttgttaccactcagtattctgcctacattgtagatgagcgatttccaact
gtacctgtcctaaaatgggctcacatgctgaagtcaccaccgatgtttgcacaagttgca
tgtggggcagccaaaaaaagagcaaacaagattgtcctggggactcagcgtacccaggaa
gtcttacttctgcagtattcaggtggatctcagcttccttgcaagtcacttggcccacca
ctgaagctttctagtatttatgatatgatgcagcatttaccggtcaagttacctcggcaa
catgaagcagttgttgagaggcttcactcccctggagcaggactcgcaacactttaccat
tgttgtggcaaaaagtccctgtcagtgattcagctctctgcagtgggagacctgttttac
cagatgctaattcgtaagaattcatcaacaagtagaaaaacctctagagtgagggttgga
tgtgatcatgaaccaaataactcaattttgactgaaagggtacaatcatcaaatcattct
acagacggtagggatgaaagagcagaagatttggcacaaggtgaaactgaaagaccagaa
ggaagttcttcgcgaagtggaggagatgaacaaagtttccaatgtactaataaaccttta
aaacccagttgtactgctcttgctacatgttcaagatgggtaaactcatttttaaagaag
caaaaaaactttcaaagtgcctccaatatgctccacaaacgtactggtatcagttcaaaa
cgtttgttttcatgtaaaacatttaagaagggtgaagaatcaactgacacatgcagggaa
ctgtgggataaaatgagtgcagttatggagaagcaacaagtcctttgtcacagtacattt
ccaatactggatcctgttagtgtcccagatgttgtggatgcctcaaattggagagatgaa
ctaagtgaaaggctaacagctgcgtgggaaggaaagtggagtcagtggtgggaagaaaag
ctaggtatgtaccgggacaggaagattcaagcactacgtgcgaaaagacgacgtgaaaaa
ttagcccagacaaggcaacggaaagcgctctcgggcagtttcacttcctcagtgtctggc
ttgtctgacttcagtgatttttcaagttggagtactttctctggaataaattcagagcac
agtgattatttgtctggtacagaaagtaatgttacatccaataaatcagctgagacaaat
caatcaattagggcagttgctgaagagtctcgtagagaaatggaggctgagtccagtgcg
gctgtagtggaacaaagccaggcaccagtaccaattttttcacaagaaatgcagttagtc
agtattcccaatgaacggaaaaggattcttcaaaattacttagctgccctggaagaccat
tcattccaacctcctcaagagggtgatgaaccaagtatgccattatcattaacttcatcc
attcagatgtcttttcctgaaccatcacaagttgcatcttcttatgaagtaccctggcga
ccatcctctcagagtcaacttggatcatctcagccgaagaagaaaagagccaagatggga
ttttaa
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