Hemiscyllium ocellatum (epaulette shark): 132818911
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Entry
132818911 CDS
T09720
Symbol
tnr
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04510
Focal adhesion
hoc04512
ECM-receptor interaction
hoc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132818911 (tnr)
04518 Integrin signaling
132818911 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132818911 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hoc00536
]
132818911 (tnr)
Glycosaminoglycan binding proteins [BR:
hoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132818911 (tnr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
FN3_DSCAM-DSCAML_C
Fn3_PBP1
EGF_Teneurin
Pur_ac_phosph_N
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
Fn3_VIN3
Fn3_ROS1
FN3_Tor_3rd
DUF4998
EGF_Tenascin
EGF_2
DUF7949
Motif
Other DBs
NCBI-GeneID:
132818911
NCBI-ProteinID:
XP_060686027
LinkDB
All DBs
Position
9:21574392..21776252
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AA seq
1317 aa
AA seq
DB search
MLRMMLTVLAICLSSLLDPGDCRLLANTPRRQNNEISARGHHINHTVTIKQQPIVFNHVY
NINVPMDSACSVRLDSSTEQMEFTQDEDGSQDSEQHPDRRVAFTHNIHVPKQTCDCPHSD
LLQSVLDRLKMLEREVSILRQQCSTGCSGQRSASGRIDYAPMCNGHGNFSMETCDCSCEL
GWTGKGCSVQCCQSNCSGHGLCVDGQCLCDQGYTGQDCSELQCPGNCSGHGLCVEAECVC
EEPYTGEDCGQLRCLNGCSQNRQCNHGVCSCQEGYTGPDCGQVFPPQRLRVTGVTDQSIA
LEWERSVVITEYLITYTPDIVDGLQSELRVPGDWTAANITGLEPGTEYSIHIYAVLNNQL
SVPINSQTTTHLPTPQGLSFKSISETAVEVQWEPFQFMFDGWEISFIAKSNEGGMVLQLP
STVTAYNQSGLRPGEEYTVNVVAIKEHSRSAPATAMVSTLIDGPNEIIVREVTDTVAFVE
WTPPRAHVDYVLLSYGLTSGTIEKTVLKLQPSLSQFSLQNLRPASQYEVSVMGIYDHGQS
QPVTAAFTTELDAPRNLHVVSPGDSRLELEWDNSQADVDKYRVVYSTLAGRQYHELIVPE
NIGLTSKVTLTDLLPGTEYGIGISAIKESKQSVPATMNARTDLDRPLGFTVIASSNHSIS
LMWTQIRGPVDHYQVNYSTANGVSSQVTIPKGSTSVTLNNLEPHTKYNLSIMAVRGWQQS
DPSIIEGMTGYYPVQELLFSDITENSVNVSWQQPTSPTDIFILNYNPRSHGETKQLTVNG
NETHTTLYNLQPGVDYLITLLAVQGTVTAKPVLGSFTTALDPPQDISFTNVSEDSVTVVW
SRPVAAFDHYRMLYQSAAVLQGLAKSVVIESYLTEYTLTDLQPATEYTVKLNTVQGSAES
QLISNTVHTAMDKPLDVRVLNMTPTEAVLEWIAPQAVVENYVILLTQNQLVANTVHADGE
TTRYQLSELQPFTNYSVTVYAVQGFMTSVSASTNFLTPLDPPRNLTVSEVTRRSALISWL
PPVADIENYVLVYKDHSGQQKELILDAEDTWIRLEGLSETTEYSLRLQSAFGTMRSTTEH
ASFTTAGRLYPYPWDCTQHLLNGDTISGIYTIYLNGEPQQSMQVYCDMTTDSGGWLVLQR
RQNGLTDFARKWSDYRVGFGNLEDEFWLGLDNIHKISAQTRYELRIDLRDGRESVYATYD
RFYLSDARNLYKLRIGDYSGTAGDSLSYHQGRPFSTKDRDNDVAITNCALSYKGAWWYKN
CHRANLNGKYGENRHSQGINWFSWRGHELSIPFVEMKVRSFNFRAMMWRGNHSLPLQ
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggatgatgctcactgtcttggccatttgcctcagtagcctcctggatccaggc
gactgtcggctgctggccaatactccccggcgacagaacaatgagatctccgccagaggt
catcacattaaccacacggtgaccatcaaacagcagcctattgtctttaaccatgtctac
aacatcaacgtgcccatggattcagcgtgttctgtcaggttggacagctccacagaacaa
atggagttcacacaggatgaagatggcagccaagacagtgaacaacatccagacaggcgg
gtagcgttcacccacaacatccatgtccccaaacagacgtgtgattgcccacactctgac
ctgctccagagcgtccttgaccgcctcaaaatgttggagagagaagtgtccatcctgagg
cagcaatgcagcactggctgctctggacaaagatcagcttcaggtcggattgactatgcc
cccatgtgtaatggccatggtaacttcagcatggagacgtgtgactgcagctgtgaactt
ggctggacaggcaagggctgctcagtgcaatgctgccagtccaactgcagtgggcatggg
ctgtgtgttgatgggcaatgcctctgtgaccagggctacacagggcaggactgcagtgag
ctgcaatgccctggcaactgcagtggacatgggctctgtgtggaagccgagtgtgtatgt
gaggaaccgtacactggagaggactgtgggcaactgaggtgtctcaacggctgcagccag
aacaggcaatgtaaccatggtgtgtgctcctgtcaagagggctacactggaccggactgt
gggcaagtgtttccaccacaacgtctccgtgttaccggtgtaacagatcaaagcattgcc
ctggagtgggagaggtctgtagtcatcactgagtatctcatcacttacactcccgatatt
gtggatgggctacagtcagaactacgagtcccaggggactggacggcagctaacatcaca
gggctggagcctggcactgaatacagcattcacatttacgctgtgctgaataatcagctg
agtgttcccatcaactcacagacaaccactcacttgcccacgcctcagggtcttagcttc
aaatcaatctcggagacagcggtggaagtgcaatgggaaccattccagtttatgttcgat
ggctgggagatcagctttattgcaaagagtaatgaaggtggaatggtgcttcaactcccc
agtaccgtcacagcctacaaccagtcaggcctgaggcctggggaggaatacacagtcaac
gtggttgcaataaaagagcacagcaggagtgccccagctacagcgatggtatcaacactg
attgatggaccgaatgagatcatcgtcagagaggtgactgacactgttgcctttgttgag
tggacccctccaagagcccacgtggactatgtgttgctgtcatatggactcaccagtggg
acgattgagaagactgtgctgaaactgcagcccagcctgagccagttctccctgcagaac
ttaagacccgcatctcagtacgaggtgtcagtcatgggcatttacgatcatggacagagc
cagcctgtaacagcagcctttaccacagagcttgatgctcctaggaacctgcatgtggtg
agccctggggacagcaggctggagctggaatgggacaacagtcaagcagatgttgacaaa
tacagagtggtgtacagtaccctggcaggcaggcagtaccatgaactgattgtgcctgaa
aacatagggctaacgagcaaagtcactctgacagacctattgcctggaactgagtatggg
ataggaatatcagccataaaggagtctaagcagagtgttccggccaccatgaacgcaagg
actgatctggaccgtcctcttggcttcactgtgatagcctcatccaatcacagcatctcc
ctcatgtggacacagattcgaggccctgtcgatcactaccaggtcaactacagcacagcc
aatggtgtcagttcacaggtgaccattccaaagggcagtacctcggtgaccctcaacaac
ctggagcctcacaccaaatacaacctgtccattatggcagtgcgaggctggcagcagagc
gatccgtccatcatcgagggcatgaccggttactacccggtgcaggagttactgttctct
gacatcaccgagaactctgtcaacgtgtcctggcagcagccaacgtctcccaccgacatc
tttatcctaaattataatccccgctctcatggagagacaaaacaattgacagtgaatggc
aatgagacccatacaaccctctacaacctccagcctggcgtagactatctcatcacattg
ctcgctgttcaggggactgtcactgcaaagccagtgctgggatccttcactacagccttg
gatccacctcaggatatatcgttcactaatgtttccgaggactcagtgacagtggtgtgg
agcaggcctgtggctgccttcgatcattaccggatgctgtaccagtcagcagctgtcctg
caggggttggccaagagtgtggtcattgaatcgtatctaaccgagtacaccctgactgac
ttacagccagcaactgagtacacggtgaagttaaacacagtgcaaggctctgctgagagt
cagctgatttcaaacactgttcacacagctatggacaagcccctggacgtgcgggttctg
aacatgactcccacagaagctgtgcttgaatggattgcacctcaggctgtggtggaaaac
tatgtcatcctcttaacacaaaatcagcttgttgcgaacactgtccatgctgatggagag
acaacacggtaccaactcagtgaactccagccgttcaccaactattccgtcaccgtctac
gctgtccaaggcttcatgaccagtgtctcagcctccaccaacttcctcactcctctagat
cctcctcgaaacctgacagtgagtgaggtcactcggcgcagtgcactcatttcctggctc
ccaccagtggccgacattgagaactatgtgctggtgtacaaggaccatagtgggcagcag
aaggagctgatcctcgatgcagaggatacttggattcgactagagggtctgtccgaaaca
acagagtactccctgagactgcagtcggcgtttggcaccatgaggagcacaacagagcat
gcctccttcactacagccggacgcctttatccgtacccttgggactgtactcagcaccta
cttaatggagacaccatcagtggcatctacaccatctacctaaacggagagccacagcaa
agcatgcaggtctactgtgacatgaccactgatagtggcggctggctcgtgctccagagg
cggcagaatggactgacagactttgcacgcaagtggagtgattatcgagtgggctttgga
aatctggaggatgaattctggctagggttggacaacattcataagatctctgcccaaacc
agatacgagttgcgaatcgatctccgtgatggccgtgaatcagtctatgcaacgtatgat
cggttctacttgagtgatgcccggaacctgtacaagctgaggattggagattacagtggg
acagctggggactccctctcctatcaccagggacgcccattctccaccaaggaccgggac
aatgacgtggcaatcacaaactgtgccttgtcttacaagggagcctggtggtataagaac
tgtcaccgtgctaatctcaatggaaaatacggggagaatcgccacagtcagggtataaac
tggttcagctggagaggtcacgaactgtccattccatttgttgagatgaaggtgcggtcc
ttcaacttcagagcaatgatgtggagaggcaaccactccctgcctttacaatga
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