Hemiscyllium ocellatum (epaulette shark): 132818939
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Entry
132818939 CDS
T09720
Name
(RefSeq) retinoic acid receptor RXR-gamma-A-like isoform X1
KO
K08526
retinoid X receptor gamma
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03320
PPAR signaling pathway
hoc04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
132818939
03320 PPAR signaling pathway
132818939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hoc03000
]
132818939
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
hoc03310
]
132818939
Transcription factors [BR:
hoc03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
132818939
Nuclear receptors [BR:
hoc03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
132818939
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
132818939
NCBI-ProteinID:
XP_060686065
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Position
9:complement(25570303..25737836)
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AA seq
465 aa
AA seq
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MYGHYHHFMKLPVTSNHSAIQVNSTSMNSPSPHSTVNSMVGHHSMIGSSANASRSLTSSM
GSLASPVNGLGSPYPVITSSIGSPSVTLPSTPGISYGALNNPQINAVNNVSSTEDIKPPP
GLSGLGNMNCYSPNSIAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDT
KDCIIDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKERSDNELEPSSSINDDMPVEK
ILEAELAVEPKTETYVDASPGNSSNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQ
VILLRAGWNELLIASFSHRSISVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKM
KDMQMDKTELGCLRAIVLFNPDAKGLSNPGEVESLREKVYASLEAFTKHKYPDQPGRFAK
LLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtcactaccaccacttcatgaaactccctgtcacctccaaccactctgcgatc
caagtgaactccacctcgatgaattccccttccccgcactctacagtgaactcaatggtt
ggccatcattcgatgatcggttcctcagcgaatgcttcacgctctctcacctcctccatg
gggagcttggcctccccagtgaatggattagggtctccgtatccagtcatcacctcgtca
ataggctccccctcggtgaccctgccatcaactccaggcatcagctacggagctctcaac
aacccccagatcaatgcagtcaacaacgtcagtagtacagaggatattaagccaccacct
ggcctcagcggacttggaaacatgaactgttacagccccaactcaatcgctaaacacatc
tgtgcgatatgtggagatcgatcctcagggaaacattatggggtatacagctgtgagggc
tgcaaaggcttcttcaaacggactgtgcgcaaggacctcacctacacttgtcgtgacaca
aaggattgcatcatcgacaaacgccaacgcaatcgctgccagtactgtcgctaccagaaa
tgtctggccacgggcatgaagagggaagctgttcaagaggagaggcaacgggggaaggag
cgaagtgacaacgagctggaacccagcagcagcatcaatgacgacatgccagtggagaaa
attctagaagcagagctagctgtggaaccaaagacagagacatacgtggatgccagtcca
ggaaattcgtccaacgatccagtcacaaacatttgccaggccgcggataaacagctcttc
acactggtggagtgggccaagaggattccgcatttctccgacctgcccctcgacgatcaa
gtcattctcctccgggcaggctggaacgagctactcattgcttcattctcacatcgatcg
atctcagtgaaggatggcatcctcctggccacaggactgcacgttcatcggagcagtgct
cacagtgcgggtgtgggctctatatttgacagagttctgacggagttggtctcaaaaatg
aaagatatgcagatggacaagactgagttggggtgtctgagagccattgttctcttcaat
ccagatgcaaaaggtttatcaaacccaggagaagtggaatctctgagagaaaaggtttat
gcatcactagaagcttttacgaagcataaatatcctgaccagcctggcaggtttgcgaag
ctgctcctacgactcccggcccttcgatcgatcgggctcaagtgtctcgagcacctcttc
ttcttcaagttgattggagacacccccatcgacaccttcctcatggaaatgctggaggcc
cctcaccaaatgacatga
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