Hemiscyllium ocellatum (epaulette shark): 132819098
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Entry
132819098 CDS
T09720
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132819098 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hoc03041
]
132819098 (prpf38a)
Spliceosome [BR:
hoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
132819098 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
132819098 (prpf38a)
BRITE hierarchy
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
132819098
NCBI-ProteinID:
XP_060686446
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All DBs
Position
9:73588857..73600376
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AA seq
312 aa
AA seq
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MANRTVKDAHSIHGTNPQYLIEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYIGGV
YGGNIKPSPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGALYMRLTGSAIDCYKYL
EPLYNDYRKVKRQKRDGDFELIHVDEFMDELLHEERVCDIILPRLQKRYVLEEAEMLDAR
VSALEEDMDDVDTSEDEDEDDDKGDRVPSPEPPRRGYRDLDRPRRSPSPRYRRSRSKTPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgaactgtgaaagatgctcatagcatccatggaaccaacccacagtatttg
atcgagaaaattatccgtacccgcatctatgaatctaagtactggaaggaggaatgtttc
gggttgacagcggaattggttgtggataaagctatggaactgaaatatattggtggcgtc
tatggtgggaatattaaaccatcaccattcctttgtctgacccttaaaatgcttcaaatt
cagcctgaaaaggatattattgttgaatttataaagaatgaagattttaagtatgttaga
ctgttgggtgcattgtacatgcgactgacaggttctgccattgattgttataaatatctg
gaaccactctataatgattatcgcaaagtgaagaggcagaagagagacggagattttgaa
cttattcatgtggatgaatttatggatgagctacttcatgaagagcgagtttgtgatatt
atcttgcccagacttcagaaacgctatgtgttggaagaagcagaaatgctggatgctcga
gtcagtgcattggaggaagatatggacgatgtagacacaagtgaagatgaagatgaggat
gatgataagggtgacagagttccatcaccagagcctccacgacgtggctaccgtgatctt
gatcggcctcgaagatcaccatctccacgatatcgaagaagtcgaagcaaaacaccaaga
cgacgaagcagatcccctaagcgaagaagcccatcgccacgtcgtgaaagacatcgcagc
aaaagtcctagacgtcatcgtagtcgatctagagatcgacgtcacagatcacgatccaaa
tcgcctggtcatcacagaagccacagacacagaagtcattctaaatcacctgaaagatca
aagaagagtcacaagaagagccgaagaggaaatgaatga
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