Hemiscyllium ocellatum (epaulette shark): 132819117
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Entry
132819117 CDS
T09720
Symbol
rnf220a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220a isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132819117 (rnf220a)
Enzymes [BR:
hoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132819117 (rnf220a)
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132819117 (rnf220a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
132819117
NCBI-ProteinID:
XP_060686485
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All DBs
Position
9:79382007..79890479
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AA seq
604 aa
AA seq
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MDLHRTAFKMENSSYLPNPLASPALMVLASTAEASRDATISCQQPRPFGVPVSVDKDVHI
PFTNGSYTFASMYHRQGGVPGAFPNRDFPPQLLHLHHQFAPPNLDCTPISMLNHSGVGAF
RPFASAEDRDSYQSAFTPAKRLKNCHENESPHLRFSDSEGKEYEFTAQLPSSSPSSLKLD
DTGKKVFAVSGLISDRENSASPEENRNERCKKKATLYDTQAPICPICQVLLRPNELQDHM
EQELEKLTQNTCKHSMLKDSTIQGTVKPVLLSAPIKREGESPTASPVSADDTHHSDRYQT
FLRVRSNRQARLNARIGKNKRKKASEDGQVCPLCNETLSGTVEEMSRHVEACLDKRDGSC
TNDDESVDIENESGSVNRFDEYEWCGQKRIRATTLLEGGFRGSGFVTCSSKENHDSDADL
DVDGDDTLEYGKPQYTEADIIPCTGEEPGEAKEREALRGAVLNGGTPSNRITPEFSKWAS
DEMPSTSNGESGKLEVQTQKTCKNSEIEKISEDATVTTIEALKARIRELERQLSRGDRYK
CLICMIVERHWGDRRTPTRCLSHQSSVGMFIVRNAGSEHWGPKNSVHSATPSHPLGISDA
FICE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggacttgcacagaacagctttcaagatggagaattcttcatatcttcctaaccccctt
gcatctccagctttaatggtcctggcctcaactgcagaggccagccgagatgccaccatc
tcctgccagcagcctagaccctttggagtacctgtctctgtggacaaagatgttcatatt
ccctttactaatggctcctatacctttgcctcaatgtaccaccgtcagggcggggtgccc
ggggccttcccgaaccgagactttccccctcaacttttacacctgcatcatcaatttgca
cctccaaatctggactgtaccccaatcagcatgctgaatcatagtggtgttggggcattc
cgacctttcgcctccgctgaagacagagacagttaccagtcagcctttacacctgccaaa
agactgaagaactgccatgaaaacgaatcccctcacctgaggttttcagactctgagggc
aaggagtatgagttcacagcccagctcccatccagttcccccagttcactgaagctagat
gacactggaaaaaaggtctttgctgtgtcaggtctcatctctgaccgggaaaactcggca
agccctgaagaaaatcgaaatgaaagatgtaagaagaaagcgaccctgtatgatacgcaa
gccccaatttgtcccatctgtcaggttctgctccgaccaaatgagcttcaagatcatatg
gaacaggaactggaaaagctcactcaaaacacatgtaagcattccatgttgaaggacagc
acaatccaagggactgtgaagcctgttctgttatcagcaccaattaaaagggagggggaa
tctcccacagcttcgccagtctctgcagatgacactcatcattcagacagatatcagaca
tttttgcgagtaaggtccaacaggcaagcaaggctgaatgcacgaatagggaaaaacaaa
agaaagaaggcctcagaggatggccaggtatgtccgctatgcaatgagacgctgtctgga
actgtggaggagatgagtagacatgtggaagcttgtctggacaagagagatggctcttgc
acaaatgatgatgagtcagtggacatagaaaatgagagtggaagtgtgaacaggtttgac
gagtacgaatggtgtgggcagaagagaatacgagctacaactttattggaaggtggcttt
cgaggatctggctttgtcacctgcagcagtaaagagaaccatgacagtgatgcagatctt
gatgtggatggcgacgacaccttggaatatgggaaaccacaatatacagaggcagacatt
ataccttgtacaggagaagaaccaggtgaggccaaagagagagaagcactccggggtgct
gtgctaaatggtggaaccccaagcaacagaataacaccagagttttccaaatgggctagt
gatgaaatgccttcaacaagtaacggggaaagtggtaaattagaggtacagacacagaag
acatgtaaaaacagcgagattgaaaagatatctgaagatgcaactgtaacgacaattgaa
gcattgaaagcccgtatccgtgaattggaacgacagctatcccgtggggatcggtataaa
tgtcttatttgcatgattgttgaaaggcactggggagacaggaggactcctactcgatgc
ctctcacatcaatccagtgttggcatgttcattgtgaggaatgctggctcagaacactgg
gggccaaaaaactctgtccacagtgcaacaccatcacatcccctggggatctcagacgcg
tttatttgtgaatga
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