Hemiscyllium ocellatum (epaulette shark): 132819287
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Entry
132819287 CDS
T09720
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc00100
Steroid biosynthesis
hoc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
132819287 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hoc01006
]
132819287 (fdft1)
Enzymes [BR:
hoc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
132819287 (fdft1)
Prenyltransferases [BR:
hoc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
132819287 (fdft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
132819287
NCBI-ProteinID:
XP_060686697
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All DBs
Position
10:764268..797446
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AA seq
474 aa
AA seq
DB search
MYCAARSAWPLAVRAMQCDSRCSALPQPRILLCTICPCHQGTRSRQYCSPCLSCCAQRAA
ATGQSLLVALTDVEKMATPRKLFFATATLVYEDSMSETLRKCYIYLNQTSRSFAAVIQAL
DGDLRQAVCIFYLVLRALDTVEDDMSIPLEVKIPMLQNFHTYLYQPEWRYSQSQEKDRQV
LEDFPSISLEFRLLAKVYQDVIANICHKMGAGMAEFLGKKVGSIKDWDMYCHYVAGLVGI
GLSRLFSASELEDPVVGKDTELANSMGLFLQKTNIIRDYLEDQQEGREFWPQEVWSKYAE
KLSDFTKPPNIQAALQCLNELITNALQHVPDVIKYLSRLHNQSVFNFCAIPQVMAIATLA
ACYNNPQVFRGVVKIRKGQAVTLMLEATNMEAVKGMIRQYTHMIGQKVPGAGSSGARTQQ
IVVKVESLSQSDGELMSRGHLSPIYLSLAVFLAAVSWQYWQTLTHTSEEYVHGH
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtactgtgcagcaagaagtgcctggcccctggcagtgcgagctatgcagtgtgattct
cgctgcagtgctcttcctcaacctcgcattctcctctgcacgatctgtccgtgtcaccaa
ggaacccgctctcggcagtactgttcaccatgcctctcctgttgtgcacagcgagcagca
gctactggacagtccctgctcgtggcacttacagatgttgaaaagatggcaactccaaga
aaattattctttgcaacggccaccctggtatatgaagattcgatgagtgaaaccctaaga
aagtgctacatttatctgaaccagaccagccgcagctttgctgctgtcattcaagccctg
gatggagatctccgtcaagcagtgtgcatcttttacctggtgttgcgggctctggacacg
gtggaagatgacatgtccatcccactggaggtgaagatcccgatgttacagaacttccac
acttatttataccagcctgagtggaggtacagccagagtcaggagaaggaccgtcaggtg
ctggaggatttcccatcgatatccttggaattccgcttactggctaaggtttaccaggat
gtgattgcaaatatctgccacaagatgggagctggcatggccgagtttttgggtaaaaag
gttggatccatcaaggactgggacatgtactgtcactatgtggcgggacttgtgggaatc
ggcttgtcccgtctgttctcggcctctgagcttgaggatccagttgttgggaaggacact
gagctggccaactccatggggctcttcctgcagaaaaccaacatcattcgggattacctg
gaggaccagcaggaaggtcgggagttctggccacaggaggtgtggagtaagtatgcagag
aagctgtctgactttaccaaacccccgaacattcaggcagcactgcagtgcttgaacgag
ctgattacgaatgctctgcaacatgtcccagatgtcatcaagtatttatccaggcttcac
aatcagagcgtcttcaacttctgtgctattccacaggtgatggcgatagccactctggct
gcgtgttataacaacccacaggttttccgtggtgtggtaaagatccggaaaggccaggct
gtcaccctgatgctggaggcaactaacatggaagctgtgaaagggatgattcgacagtat
acccacatgattggacagaaagttccaggtgcggggagttctggagccagaacacagcag
attgtggtaaaagtggagtccctgagccagagtgatggggagctgatgtctcgtggtcac
ctttcacctatttacctgtccttagctgtgttcttggctgcagttagttggcaatactgg
cagaccctgactcacacctcagaggagtatgtgcatgggcactga
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