Hemiscyllium ocellatum (epaulette shark): 132819427
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Entry
132819427 CDS
T09720
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132819427 (taf1a)
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
132819427 (taf1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
COG4_N
FANCI_S3
Motif
Other DBs
NCBI-GeneID:
132819427
NCBI-ProteinID:
XP_060686904
LinkDB
All DBs
Position
10:complement(51580972..51619147)
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AA seq
450 aa
AA seq
DB search
MDDGIAELIAERDNSTDDGPVQASSSRPEICLHLPRSILQFQNIKDAKQTGFRRTVQTCL
SRIEKAMLHHQWQTAAELMTSFFQILEDNTTRKQASASKAIWTIGTAILQYHPNSCIEDV
SSFARKMKSIGVKHYLKICLEHAIHLLCNGKMEEAYRELSLAETWRYGENSAAQQKVLKL
IQGYRSLLDYYTWVKKNSALHEQGDAEINSGRAQEMHNYFRQASIGLRDAVENPGVWDPF
ILSYVNLLDFYDGFEEALAVLDNYAYNSRFPPNPNAHVYLYEFLKKHNTSAKKLIKVLRI
LHQLVPSHELMLEFHSLLLQSKKKKHRKEALGVLFCLLDFSTWKENYHVWKCLIKQMKKV
IAEGHCDWIHEHWESRQDWWPAYHFSKFRAHRDFEQNESYASRKAMVAGILMGKGCKYFV
TIYRLGYKLQEAKLKKMRQYIKNHSLPNKS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgggattgctgagctaatagcagaaagagataactcaactgacgatgggcct
gttcaggcgagcagttcacggccagaaatctgtttacacctgcctaggagtatacttcag
ttccaaaatatcaaagatgcaaagcaaactggtttccgacggacagtccaaacttgtctg
agtcgcattgagaaagccatgcttcatcaccagtggcagactgctgccgaactgatgaca
agcttcttccagatcttagaagacaataccaccagaaaacaggcttctgctagtaaggcc
atttggacgattggaactgcaatacttcagtatcatcccaatagctgcattgaggacgtc
agttcatttgctaggaaaatgaagagtataggagtcaaacattacctgaagatctgcttg
gagcatgctattcacctgctgtgcaatggaaagatggaggaagcctacagggaattgtct
ctagctgaaacatggcgatatggtgaaaattctgcagctcagcaaaaagtgctgaaactc
attcagggttataggtcattgcttgactattatacatgggttaaaaagaatagtgctctt
catgaacaaggtgatgccgaaatcaattcgggcagagcgcaagagatgcacaactatttc
cgacaagcctccattggtctacgtgatgctgtagaaaatcctggtgtttgggatcccttc
atactcagttatgtaaatctccttgatttctacgatggttttgaagaagcactggccgtg
ttagacaattatgcttataatagcagatttccaccaaacccaaatgctcatgtatatttg
tacgagttcctgaaaaaacacaatacctcggctaaaaaactgatcaaagtactgaggatc
ttgcatcagctggttccttcccatgaactgatgttagaatttcactcgctactacttcaa
tcaaaaaaaaagaagcatcgtaaggaagcactgggtgtcctcttctgtcttctagatttt
tctacatggaaagaaaactaccacgtatggaaatgtttaataaaacagatgaagaaagtt
atagctgagggtcactgtgactggatccatgagcattgggagtccagacaagactggtgg
cctgcatatcatttcagcaaatttcgcgcacacagggattttgaacaaaatgagagctat
gcttcaaggaaagcaatggttgcaggaatcctaatggggaaaggctgcaaatactttgtc
accatttaccgacttggatataaacttcaggaagcgaaattgaagaagatgagacaatat
ataaagaatcacagtctgccaaataaatcttga
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