Hemiscyllium ocellatum (epaulette shark): 132819496
Help
Entry
132819496 CDS
T09720
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03013
Nucleocytoplasmic transport
hoc03015
mRNA surveillance pathway
hoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132819496 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
132819496 (eif4a3)
03015 mRNA surveillance pathway
132819496 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132819496 (eif4a3)
03041 Spliceosome [BR:
hoc03041
]
132819496 (eif4a3)
03009 Ribosome biogenesis [BR:
hoc03009
]
132819496 (eif4a3)
03012 Translation factors [BR:
hoc03012
]
132819496 (eif4a3)
Enzymes [BR:
hoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132819496 (eif4a3)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132819496 (eif4a3)
mRNA cycle factors
Stress granule specific factors
132819496 (eif4a3)
Spliceosome [BR:
hoc03041
]
Complex C
Other components
EJC/TREX
132819496 (eif4a3)
Ribosome biogenesis [BR:
hoc03009
]
Eukaryotic type
90S particles
Helicases
132819496 (eif4a3)
Translation factors [BR:
hoc03012
]
Eukaryotic type
Initiation factors
eIF-4
132819496 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
132819496
NCBI-ProteinID:
XP_060687024
LinkDB
All DBs
Position
10:complement(87537811..87562674)
Genome browser
AA seq
403 aa
AA seq
DB search
MASSGRKRILKEEDISKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRA
IKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLA
LGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDE
ADEMLNKGFKEQIYDVYRYLPPATQVILISATLPHEILEMTNKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMH
GDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRS
GRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttccgggaggaagcgcatcctgaaggaggaagacatctccaaggtggagttc
gagacaagtgaggaggtcgatgtcactcccacgttcgacaccatgggcttgcgggaggac
ttactgcgggggatctacgcgtacggctttgaaaaaccatcagcaattcagcaaagagcc
atcaagcaaataatcaaagggagagacgtcattgctcaatcccagtctggtacagggaag
actgcaacattctgcgtgtcagtattacagtgcttggacattcaggttcgtgagacccaa
gctttaatattggcaccaacacgggaacttgcagggcagatacagaaggtcctccttgct
cttggtgactatatgaatgtacaatgccatgcttgtattggaggtaccaatgttggagaa
gacattcggaagttggactatggacagcatgtagttgctggtactccagggcgtgtattt
gatatgatccgaaggcgaagtttgaggacacgtgccatcaaaatgttggttcttgatgaa
gcagatgagatgctgaacaaaggttttaaggagcagatctatgatgtgtacaggtattta
cccccagccacacaagtaattctgatcagtgcaacactgcctcatgaaatcctggaaatg
accaataagttcatgactgatccgatcagaatccttgtcaaacgtgatgagttgaccttg
gaaggaatcaaacagttctttgtagcagttgaaagggaggagtggaaatttgatacattg
tgtgacttgtacgacacactgaccattactcaagctgttatattctgcaatacaaaacgg
aaggtggactggctcactgaaaaaatgagagaggccaatttcacagtgtcatcaatgcat
ggtgacatgccacaaaaggagagggagtccatcatgaaggaattccgttctggggcaagt
cgagtgctcatttcaacagatgtttgggcacgaggattggatgtccctcaggtctcatta
atcataaactatgatttaccaaataacagagagttgtatatccacaggattggtcgatcg
ggtcgatatggccggaaaggtgtggctatcaacttcgttaagaatgatgacattcgtata
ctgcgagatattgaacaatactattctacacagattgatgaaatgccaatgaatgttgct
gaccttatttga
DBGET
integrated database retrieval system
