Hemiscyllium ocellatum (epaulette shark): 132819505
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Entry
132819505 CDS
T09720
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132819505 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132819505 (taf5l)
03036 Chromosome and associated proteins [BR:
hoc03036
]
132819505 (taf5l)
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132819505 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
132819505 (taf5l)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
132819505 (taf5l)
STAGA complex
132819505 (taf5l)
TFTC complex
132819505 (taf5l)
SAGA complex
132819505 (taf5l)
SLIK complex
132819505 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
TFIID_NTD2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_Vps41
PEP5_VPS11_N
PROPPIN
WD_LRWD1
Beta-prop_DCAF12
Ge1_WD40
Mala_s_1-like
DUF7165
Motif
Other DBs
NCBI-GeneID:
132819505
NCBI-ProteinID:
XP_060687043
LinkDB
All DBs
Position
10:96892410..96943577
Genome browser
AA seq
587 aa
AA seq
DB search
MKRVRTEQIQTAVGHYLRRRQYVDSDGALKQGPKFSQTAEEMATNLTVQTESGSPNVVSA
APCQADPNQYEIQFARLKIFLFDTDSKYSQEVKQLLYPLFVYLHLDMVHSGLKSAADSFY
SRFHGMFLQSTDQKDIMEQLRTTLNSQDIYSNSKLRNLTENKYVLSLTEESYNYLLRYLQ
SDNNSALCKVLSSRVELDVQCSPQTGYQLYNAGTLSRTEGVGLEPSELPSAMLQNEAALD
MLQDSIKRVKDGPPSLTTICFYAFHNTDQLLNTAEISPNNKLLSAGFDNSCIKLWSLRAK
KLKYGPQQVDVSRINLACDILDDEVEDDVGSEMKILRGHCGPVYGTKFLSDNSGLLSCSE
DTTVRYWDLCSFKNTGLYQGHAYPIWDIDISPLSLYFVTGSHDRTARLWALDRTYPLRIY
AGHLADVDCVKFHPNSNYIATGSIDKTVRLWSTQQGNTVRLFTGHRGPVLALAFSPNGKY
LASAGEDQRLKLWDLASGTLFKELRGHTDNITNLAFSPDSSLIVSASVDNSVRVWDIHNT
YSNSLVDGSSSELVGVHMGPTSNLLSVQFMACNLVLVTGVAQEKKEQ
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgtacgtacagaacagattcagactgcagtggggcactacctccgaagaaga
caatatgttgactctgatggagccctgaagcaaggacccaagttttctcagactgcagaa
gaaatggcaactaacttaacagttcagaccgagtctggttctcccaatgtggtgtctgca
gctccctgccaagctgatcctaatcagtatgaaatacagtttgcacggctgaaaatcttc
ctttttgataccgactcaaagtacagccaagaagtgaagcaattgctctatcctttattt
gtctacctccaccttgatatggttcacagtggtttgaagagtgcagccgatagtttctac
agtcgctttcatgggatgttcctacaaagtacggaccagaaggacatcatggaacagctc
cggactactctgaatagccaggacatttattccaactccaagctgcgaaacctgaccgaa
aataaatacgttcttagccttactgaagaaagttacaactatctcctccgctacctccag
agtgacaataatagtgctttgtgcaaggttctgtcctctcgtgttgagctggatgtgcag
tgttctccacagacaggctatcagctgtataatgccgggacgctatctcgcaccgagggg
gtgggcctggagccctctgagctaccctctgctatgttgcagaatgaagctgccctggac
atgttgcaggacagcataaaacgggtaaaagatgggcctccctccctcacaacgatttgt
ttctatgctttccacaacacggaccagctgctcaatactgcggaaatttcgccgaacaat
aaactgctcagtgctggctttgataactcttgcatcaaactctggagcttgagggcgaag
aaactcaaatatggcccacagcaagtggacgtctctcggatcaacctcgcctgtgacatc
ctggatgatgaggtggaagatgatgtgggcagtgaaatgaaaatcctacgaggacactgt
gggcccgtgtatggtaccaagttcctctctgataattcaggacttctgtcttgttcggaa
gacacaacagtccgatactgggatttgtgcagtttcaagaacactggtttgtatcaagga
catgcttatcccatctgggacatcgatattagtcccttgagcctttactttgttactggg
tcacatgatcggacagcaagactttgggcacttgacagaacataccctctacgcatttac
gcaggccacctagcagatgtagactgtgttaagttccatccaaattctaattacatagcc
acaggctcaatagataaaactgtgcgactctggagtacgcagcaagggaatactgtccgt
ctcttcacaggacatcggggacctgtgttggcattagctttctctcctaatggaaagtac
ttggcctcagcaggtgaagatcagcgactaaagttgtgggaccttgcatcaggtacttta
ttcaaagaactgagagggcatactgacaatataacgaatcttgcatttagtcccgacagc
agtttgatagtttctgcatctgtggataattcggtccgtgtgtgggatattcataacact
tattcaaattcactggtggatggttcctccagtgagctggtgggtgtacacatgggacct
accagtaaccttttgagtgtgcagttcatggcctgcaatctggtcttggttactggtgtt
gcacaagagaaaaaggaacaataa
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