Hemiscyllium ocellatum (epaulette shark): 132819705
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Entry
132819705 CDS
T09720
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132819705 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132819705 (msh2)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
132819705 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
132819705
NCBI-ProteinID:
XP_060687352
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Position
10:complement(29842242..29931833)
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AA seq
934 aa
AA seq
DB search
MAVQPRDRLSGADSGQDGGAFVAFYKSMPEKPDTTFRVFDRNDYYTVHGKDAMFAAREVF
KTNGVIKTLGSGNNKIESVVLSKMNFESVVRDLLLVRQYRVEVYRNKAVSKSSKENDWYL
ACKASPGNLTQFEEILFGNSDMSAAAAVVGVKLGMADGQRLIGVGYVDSTLQKLGVCEFP
DNDQFSNLEALLVQIGPKECVLSGGEMAGDGTKLRQIVQRGGVLITDRKKSEFTNKDIVQ
DLNRLLKGKKGEQVSSAALPEMEKQVAMSSVSAVIKYLELLSDKTNFGQYELITFDLSQY
MRLDNAAVSALNLFQGASEDPSNTQSLAGLLNKCKTPQGQRLVNQWIKQPLMDKNRIEER
LNLVEAFVDDTELRQNLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRIYQAVIHLPNMVQ
VLDRYEGVHKMLLKDVFISPLTDLISDFGKFQELIETTLDLNQVENHEFLVKPSFDPNLT
ELREKMDNLEKDMQSTLNQAARELGLEAGKTVKLESNAQLGYYFRVTCKEEKALRNNKKF
NTIDIQKNGVRFTNSKLTSYNEDYMKSREEYEEAQNVIVKEIINISAGYVEPQQTLNDVI
AQLDAVVSFAHVSNGAPVPYVRPKILEKGHGRITLKASRHPCIEVQDDMAFIPNDVTFEK
DKQMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCDSAEISIVDCILARVGAGDSQL
KGVSTFMAEMLETASILRSATEQSLIIIDELGRGTSTYDGFGLAWAISEYIATKICAFCM
FATHFHELTALADQVPTVSNLHVTALTTDETLTMLYRVKKGVCDQSFGIHVAELAQFPKH
VIQSAKDKAMELEEFQNIGNSGDSDEGPAAKKSRQEKQDGERIIAEFLSNIKALPITKMS
EEDVKQELMKLKSEVLAQNNSFINGIISRSTISL
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaacctcgggacaggttgtccggagcggacagcgggcaggatggtggtgcc
ttcgttgccttctacaagtctatgcccgagaagccggacaccacttttcgtgtctttgac
cgtaacgactactacacggtgcatgggaaggacgcgatgttcgccgcccgggaggtgttc
aaaaccaacggagtgatcaagaccctgggatcgggaaacaataagattgaaagtgttgtg
ttaagtaaaatgaactttgaatctgtggtcagggatcttctgttggtccgacagtaccgt
gttgaggtttataggaacaaagctgtgagtaagtcctcaaaggagaatgattggtacttg
gcctgcaaggcttctcctggtaacctcactcagtttgaagagatactttttggcaacagc
gatatgtctgctgcagctgccgtagtgggtgttaaactgggcatggcagatgggcagagg
ttaattggtgttggctacgttgactccacactgcagaagcttggtgtgtgtgagttccca
gacaatgatcagttttccaatctggaggctctgttggtgcagattgggccaaaggaatgt
gttttatcaggtggcgagatggcaggagatggcactaaacttcgacagattgtacaacga
ggaggcgtcttgataacggatagaaagaaaagtgagtttacaaataaggatattgtacaa
gatctaaaccgcctgctgaaagggaagaaaggagaacaagtgtcaagtgctgctttacca
gagatggaaaaacaagtcgccatgtcttctgtttctgctgtgatcaaatatttggagctt
ttgtctgataaaactaactttggccaatatgagttgattacatttgacctgagccagtat
atgaggctggataatgcagcagtcagtgcgctcaatctttttcagggtgcatcagaagac
cccagcaatacacagtcattggctggtttactgaacaaatgtaagacccctcagggacag
cgtctcgtcaatcagtggatcaaacaaccactgatggacaagaataggattgaggagaga
ttgaacctggtggaagcttttgtggatgacactgagttacggcagaacttacaggaggat
ttgcttcgacgctttcccgaccttaaccgtctggcgaagaagttccagcgtcaggcagca
actctgcaggactgctatcggatttatcaggctgtcattcatctcccaaatatggtgcag
gtgttggatagatatgaaggcgtacacaagatgttgttgaaagatgtgtttatctcccca
ttgactgaccttatctccgattttgggaagtttcaggaattgattgagacgacattagac
ctgaatcaagtggaaaaccatgagttcctagtgaagccatcgtttgacccaaatctaact
gaactcagagagaagatggataatttggagaaagatatgcagtcaacactcaaccaagct
gcaagggagctaggtcttgaagctggcaagactgtgaaactggagtcgaacgctcaattg
ggttattatttccgtgtcacttgcaaggaggaaaaggctcttcgtaacaataagaaattt
aacaccatagatatccagaagaacggagtccgattcactaacagtaaattgacatcatac
aatgaggattacatgaagagtagggaggagtatgaagaagctcagaatgtgattgttaaa
gaaatcatcaatatctcggcaggatatgtggaacctcagcaaactttaaatgatgtgatt
gctcaactggatgcagtggtcagttttgcccatgtatctaatggagcgccagtgccgtac
gtaagacctaagatcttggagaagggccacggtcgaattaccttgaaggcttccaggcat
ccatgcattgaggttcaggatgatatggccttcatacccaacgatgttacctttgagaag
gataagcagatgttccatataataacaggtccaaacatgggtggtaaatcaacatatatc
cgacagactggtgtggtggttctgatggctcagattggttgctttgtgccctgtgactct
gcagaaatcagtattgttgattgcatccttgctcgagttggtgctggagacagtcagctg
aaaggtgtttcaaccttcatggcggaaatgttggagactgcatctattttgagatcagca
actgaacagtctctgattattattgatgaattgggaagaggcacctctacatatgatggc
tttggactggcctgggctatatcagaatacattgccaccaagatttgtgcattttgtatg
tttgccactcatttccatgagttgactgccctcgctgaccaagtaccaacagtcagcaac
ttgcacgtgacggcgctcaccacagatgaaacactaactatgctgtaccgtgtaaagaaa
ggtgtttgtgaccagagttttggtattcatgtagctgagcttgctcagtttcccaaacat
gttattcaaagtgccaaggacaaagccatggagcttgaggaattccaaaatattgggaat
tctggggattctgatgaagggcctgcagctaagaaatcccgccaagaaaagcaggatggt
gaaaggatcattgcagaatttttgtcaaatatcaaagctttaccgattactaaaatgtct
gaagaagacgttaagcaagaactgatgaagctgaagtctgaagtgctggcacagaataac
agttttatcaatggaattatttcaagatctacaatctccctataa
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