Hemiscyllium ocellatum (epaulette shark): 132819798
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Entry
132819798 CDS
T09720
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132819798 (arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hoc03000
]
132819798 (arid1b)
03021 Transcription machinery [BR:
hoc03021
]
132819798 (arid1b)
03036 Chromosome and associated proteins [BR:
hoc03036
]
132819798 (arid1b)
Transcription factors [BR:
hoc03000
]
Eukaryotic type
Helix-turn-helix
ARID
132819798 (arid1b)
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132819798 (arid1b)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132819798 (arid1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
132819798
NCBI-ProteinID:
XP_060687556
LinkDB
All DBs
Position
10:69796564..70405649
Genome browser
AA seq
2362 aa
AA seq
DB search
MIMAAQVAAAPANSSSNGSSPGLSSRDPDSINNGKPAAVAAPGGGLGGDGGDPSGGGLSL
NSVDHHHHPRHHHHHHHHHLHLPHQQQHHHGELNMANSSGPGPGPANNNSGGGGGTAGGS
GSASSNPNPEPTHKEPASASPSSASTASSSSSAASEAGIISNHKLKPTGAELLLPPHHQG
EGGGGVETQHGGGGGGGKDNILLTADNQGNNKADDQLLKMGDQRYEHPAAAGSNTQTEPA
PGLPDYNHYYRAAAGTGPGPGPYFDQHGGQQSPGLGLHPSSSLELSASPLHNSHDSYSNN
YNHYSSYRPAYSGPGYSMMNSPRANNMGSGVATNSGHHHHHHGKQQPPLAGAFQRYSSQN
QHSGATPTLNQLLTSPSPMRGYGFSDYSNPGLSQASLKGNDMSSQYGIGSSQAWGGGGGG
GGGGGGGGGGGGAAAGQARSHPAMSPGSSAQPLGRTQGNPVEQMGMKRPQLYGMNNNPYS
QQQHQQQSGPYPGQSYGPPTPQRYPVTMQGRNPSNMGGMQYLQQQMPPQYSQQGMTGYCQ
QGQQPYYNQQQQQQSSYMQQAQQRYQPQQQQDISQEGYGARTVPPLTPSKPNHEDLNLLQ
QERPSSLPDLSGSIDDLPTGTEGTLSSGVSASGSSSGQGEPSNPAQSPFSPHASPHLSGI
RGPSPSPVGSPVGSNQSRSGPLSPAGVPGAPMPAQPPNSQSDASSHPIMSQSPMSQDRGF
IPGMQRNSQISQYGSQHSGPPISPHPSPGGQVQPGTVPYQQSNSSSTYGPQSGQYGPQGC
AMSVKRNGSTHGSEGKDRGTVGLDIVKNVDGNPGGNYPRPPNYGVIPSTNYSGPGPGMGS
NISVNMSNQMHGQGPAQPCSNMTMGRMPSSGMSNWPYSGNMGNMTPNSPNMSQQVGAGMG
PPMATVNRKAQEAAAAVMQAAANSAQNRPPYIRSPGFPSQTGPGGRPVFPPQHPNYGNTQ
APMMYQPDQYGQSGYTGMNQSSMMGSSSPYSQSVNNSSIMSNPQTTSYNMASSMVNNSSA
SMGLGADMMAQADSKLQVPQKMDIKEEGPPPTETKSKDSYNSQGISQPLTSGNLPTLSPM
SPSSTSISSMHGDESDSISSPGWPKTPSSPKSNSSTTGDKITRLYELGSEQERKMWIDRY
LSFMEEKGTPVTTLPAVGKKPLDLYRLYVCVKEVGGLAQVNKNKKWRELATTLCVGTSSS
AASSLKKQYIQYLFAFECKIERGEEPPPEMFSSAESKKQPKIQPPSPAGSGSLQGPQTPQ
STSSSLAESGDLKPPTPVSTPLGQMTPIQGNSRNNAISVQDPFSDVSDPAFQKWGSMTPN
APYQQGMNMPEMMSRMSYEPNKDPFGGMRKVPGSNDPFMPPGVMPNSGMQDLYNRTPSGG
MVNLNMGQRQQYAYGSSYERRPEHGMGPEGNMGPPGGQSNMMSSNSDTSMYSPNRYPAQQ
RHDPYGQQYPGQGPSSGQTAYGGHQTGIYQQQQNYKRPMEGIYGPPPKRHESDMYNMQYG
NQQQEMYNQYGNTYTGPDRRSMQNQYPLTYNRERMQGPGPVQQHGMPPQMMGGPMQVSST
EGPQQGMWQSRNDMPYPYPNRQGPGAPPQASPYAGMNRTDEMVLPDQRMNHEGQWPSHVN
QRQPSYMSSASMPPISRPPQSSYQTTPSMPNHISRAPSPAPFQRSLENRMSPNKSPYMSS
MKMQKVGPPVPASQVVVPQQQQPPLRREITFPPGSVEASQPVLKARRKLTSKDTGTPEAW
RVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLREIFGI
LKEYEVGDPGQKALLDPDAFKKDHVNHTVDDIKKEEGEEQLDYDDHYDDSDGDDTDGEED
GQSGSEDSRVNFATNDSQVGGEKPKQASKFDRLSLKIVKKKDLFVVDRTNKLGRVQEFDS
GLLHWKIGGGDTTEHIQTHFESKMKMLSRKKVQACLSGPSKEKKTKEHEIFENLNTEEQP
EKSITATIDDVLSARPGALPEDNSNRLTSETGSSKFLFGIHQAKAHRNIKLLEDEPCSRD
ETPLCTISDWRDSLAKRCICVSNIVRSLSFVPGNDAEMSKHSGLILILGKLILLHHEHPE
RKRTPRTYEKEEEEDEGVACNKDEWWWDCLEVLRENTLVTLANISGQLDLSVYPESICLP
ILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSR
QEKLYATLVRYVGDRRISVCREMSVALLSNFAQGDTLVARAIAVQKGSISNLISFLEDGL
TVAQLQHSQPNLMHMQPPPIEPTSVHMMCRAAKALLAMARIEENRSEFVLYEGRLLDISI
SSVLNSMVASVICDTLFMIGQL
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggccgctcaagtagcagcagctccggccaacagtagcagcaacggtagtagc
cccggcctaagcagccgcgacccagacagcatcaacaacggaaaaccggcggcggtggcg
gctccgggaggaggactcggcggtgacggcggagatcccagtggcggcggcttgagcctg
aacagcgttgatcatcatcaccatcctcgccaccaccatcaccaccaccaccatcacctt
caccttccccaccagcagcagcaccaccacggcgagctcaacatggccaactcctcgggg
cctggccccggtccggctaacaacaacagcggtggcggcggcggcactgctggaggctcg
gggtcggcctcgtccaaccccaaccctgagccaacgcacaaagaacccgcctcggcctcg
ccttcctcggcgtccaccgcctcctcctcatcttcggccgccagtgaggcggggataatt
tctaatcacaaactgaaacccaccggcgctgagttgttgcttcctccccatcaccaagga
gaaggaggcggcggggtagagactcaacatggaggcggcggcggtggtggtaaagacaac
atcttgttaaccgctgacaaccagggaaacaacaaggccgacgaccaattgctcaaaatg
ggtgatcagagatatgagcacccggcagctgcgggctccaatacccaaacggagccggct
cctggcctccccgattataatcattattaccgggcggcggcaggaacaggccccggtccc
ggaccctacttcgatcaacatggcggacaacaaagcccggggcttgggcttcatccttcc
agcagcttggagttaagcgccagcccgctacacaactctcacgacagctattcaaacaac
tacaaccattactcgagctacaggccggcctacagtggccctggttacagcatgatgaac
tcgcccagggccaacaatatgggatccggtgtggccaccaacagcggccaccatcatcac
catcacggcaagcaacagccgcctctggccggggcatttcagcgctactcgagccaaaac
cagcattcgggggccacaccaaccctcaaccagcttctgacctcccccagccccatgagg
ggatatggcttttcggactacagtaatcctggtctttcgcaggcctcgctgaaagggaac
gacatgagcagtcagtacggaatagggagcagccaagcctggggaggcggaggaggagga
ggtggtggtggtggcggcggcggcggcggtggtggagcagcggcaggacaagcccgcagc
cacccagccatgagccctggcagctcggcgcagcctctaggcaggacacagggcaaccca
gttgaacaaatgggtatgaagagacctcagctatacgggatgaacaacaatccttattca
cagcagcagcatcaacagcagagtggaccttaccctgggcagtcatatggacctcctaca
ccacaacgttatccagtaaccatgcagggcagaaatccaagtaatatgggaggaatgcaa
tacttacagcaacagatgccccctcaatatagtcagcagggtatgactggttactgccaa
cagggccaacagccttactacaatcagcagcagcaacaacaatcttcatacatgcaacaa
gcacagcagaggtaccaaccccaacagcaacaggatatatctcaggaaggctatggagct
cgcactgtgccgccattgacacctagcaagcccaaccatgaagatttgaacttgttacag
caggaaagaccatcaagtttgcctgatttatctggatccatcgacgatttaccaacaggg
acagaaggtacactaagttctggagtgagtgcttcaggatcctcaagtggccaaggagaa
ccaagtaatcctgcacaatctcccttctcccctcatgcttcgcctcatctgtctggtatc
cggggcccctccccctctcctgttggttctcctgttggaagcaatcagtccaggtctgga
cccctgtccccagcaggtgtaccaggagctccaatgccagctcaacctcccaatagccaa
tcagatgctagttctcatcctatcatgagtcagtcacctatgtcacaggatcgaggtttt
ataccaggtatgcaaagaaactctcaaatatctcagtacggttctcagcattctggtcct
cctatttctccgcatccatcacctggagggcaagtgcaacctggtacagttccttaccag
caaagcaattccagcagcacttatggtcctcaaagcgggcaatatggaccacaaggttgt
gccatgtcagttaaaagaaatggcagcactcatggatcggaaggaaaggacaggggcact
gtcggtctcgatatagtaaagaacgtcgacggaaaccctggaggtaattatccaagaccg
ccaaattatggtgtaataccgagcaccaactacagtggtccaggcccaggcatgggtagc
aacataagtgtgaatatgagcaaccagatgcatggtcagggtccagctcaaccttgcagt
aacatgactatggggagaatgccatcatcagggatgtcgaactggccgtactctggcaac
atgggaaatatgaccccaaactctccaaacatgtcacagcaggttggcgcaggaatgggt
ccacccatggcaactgtaaatcgcaaggcgcaggaggctgctgctgcagtgatgcaggct
gcagcaaactctgctcaaaacaggccaccgtatattaggtcgcctggttttcccagtcaa
actgggcctggtggacgtcctgtctttccaccacaacatcccaactatggcaacactcag
gctcccatgatgtaccagcctgaccagtacgggcaaagtggatacactggaatgaaccaa
agtagtatgatgggctctagctctccatacagccaatctgtgaataacagctcgataatg
tcaaaccctcagactacttcatacaacatggcatccagcatggtgaacaactcttcagct
tcaatgggtctcggagcagacatgatggcacaggccgattccaaacttcaagtacctcag
aaaatggatattaaagaagaaggaccccctccgactgagaccaagtctaaggatagctac
aactctcagggtatttctcagccccttacctcaggcaacctgccaaccctttcccccatg
tccccaagctctactagcatctcctcaatgcatggagatgaaagtgatagcattagcagc
ccaggctggccaaagactccgtcaagccctaaatcaaactcttccacaactggtgacaag
ataaccaggttgtatgagctggggagtgaacaggaacgcaagatgtggatagaccgttat
ctgtccttcatggaggaaaaaggaacaccagtgaccacattacctgctgtgggcaaaaaa
ccattggacctttatcgactttatgtctgtgttaaggaagttggtggtttggcacaggtt
aacaaaaacaaaaaatggcgtgaactggcaacgactctgtgcgtaggtacatcaagcagt
gcagctagctcactaaagaaacaatatattcagtacctgtttgcctttgaatgtaagatt
gaacgtggagaagaaccccctcctgagatgttcagttctgccgaatccaaaaagcagccg
aaaatacaaccaccttctcctgcaggttcaggttccttgcaaggaccgcagacacctcag
tccacaagcagctcgttggcagaaagtggagatttgaaaccgccgacccctgtctcaaca
ccacttggacaaatgacacctattcagggtaacagcaggaataatgcaatcagtgtgcag
gatcccttctccgacgttagcgatccagcattccagaaatggggctccatgacaccaaat
gctccgtaccaacaggggatgaatatgcctgaaatgatgagtcgaatgtcatatgaaccc
aataaagatccctttggtggtatgaggaaagtgcctggaagtaatgacccttttatgccc
cctggagtaatgcctaacagtgggatgcaggatctgtacaaccgtacaccgtcaggagga
atggttaacttgaacatgggtcagcgccagcagtatgcgtacggatccagctatgagcga
aggcctgaacatggaatgggtcctgaaggcaatatggggcctccaggaggtcagtctaac
atgatgtcatcaaacagtgacacaagcatgtactcaccaaaccgctaccctgcacaacaa
aggcatgatccttatggccaacagtacccaggccaaggtccctcctcaggacagacagca
tatggaggccatcagacaggaatttatcaacagcagcagaactataagcgacccatggaa
ggcatatatggtcctccaccaaagcgtcatgagagtgacatgtacaacatgcaatatggc
aaccaacagcaggaaatgtacaaccaatatggaaacacttacactggaccagacaggaga
tccatgcaaaaccagtatccgttaacatacaatagagagagaatgcagggtccaggtcca
gtgcagcaacatggaatgccaccacaaatgatgggaggaccaatgcaagtatcctccact
gaagggccacagcagggcatgtggcaatcacggaatgatatgccttacccatatccaaac
aggcaaggccccggagcacctccgcaggcatcgccatatgcagggatgaatcgcactgat
gaaatggtattacctgaccagagaatgaaccatgaaggtcaatggccttctcatgtgaac
cagcgtcagccttcatacatgtcttcagcttccatgcctcctatctcacgaccacctcag
tcctcctaccagactactccttcaatgccaaaccacatttccagagcaccaagtccagct
ccctttcagcgatctttagaaaaccgaatgtctcccaacaaatctccctatatgtcgtcc
atgaagatgcagaaggttggccctccagttccagcctcacaggttgttgtcccacaacaa
cagcaacctccattaaggcgggaaattacattccctcccggttcagtggaagcatcacaa
ccagtcttaaaagcaagacgaaaacttacctcaaaagatactggaactccagaggcatgg
agagttatgatgtccctcaaatctggtctgttggctgaaagcacttgggctctggacacc
atcaacatcttactttatgatgatagcactgtagccacattcaacctctcccaattgtct
ggtttcttggaacttctggtcgaatatttccgaaaatgtttgagagaaatatttggaatt
ttaaaagaatatgaggttggagatccaggtcagaaggctctccttgatccagatgctttt
aagaaagatcatgttaaccatactgtggatgatattaagaaggaggaaggtgaagaacag
ctagattatgatgatcattacgatgactctgatggtgatgacactgacggagaggaagat
ggccagtctggaagtgaagacagccgagtcaactttgcaacaaatgattcacaggttggt
ggtgagaaaccaaaacaagccagtaaatttgacagactgtcattgaagattgtgaagaaa
aaggatctttttgtagttgatcgtacaaataaacttggtagagttcaagaatttgacagc
ggattgctccattggaagattggtggaggtgacacaacagagcacattcagacccatttt
gagagtaaaatgaaaatgctatctcgcaagaaggtgcaggcatgcttaagcggtccaagt
aaagagaaaaaaacaaaagaacatgagatctttgaaaacctaaatacagaagagcagcca
gaaaagagtatcacagcaacaatagatgatgtattgtcagcacggccaggagctctacca
gaagacaattctaatcgtttgacttctgaaacaggcagcagtaagtttctatttggtatc
caccaagcaaaagcacatagaaatataaagttattggaggatgagccttgtagccgtgat
gagactccattatgcacaatctctgattggcgggactctttggcaaaacgttgcatatgt
gtgtcaaatatagttcgtagcttgtcttttgtgcctgggaatgacgctgaaatgtcaaag
cactcaggcctaatacttattttggggaagctaattttgcttcatcatgagcatccagaa
agaaagagaacaccacgaacttatgagaaagaggaagaagaggacgaaggggtagcctgc
aacaaagatgaatggtggtgggattgccttgaggttttacgggagaacacgttagttact
ttagccaacatttccgggcagctggacctgtctgtatacccagaaagcatttgtttgcca
attttggatggcttgctacactggatggtctgcccttcagcagaagcccaggatcctttc
ccaacagtgggacctaattcagtgctttcaccacagagacttgtgttggagactttatgt
aaactcagcattcaggacaataatgtagatctcattctggcaacgccccctttcagccgt
caggagaaattatatgctactctggttaggtacgtgggagaccgaagaatttcagtctgc
cgagaaatgtccgttgctttgttgtcaaactttgcccagggggacacattggtggcgaga
gctattgctgtgcaaaaaggaagcatcagcaatctgatcagcttccttgaggatggcctt
actgtggcccaacttcagcacagtcagccgaatttgatgcacatgcagcctccacctatt
gaaccaaccagtgtgcacatgatgtgtcgagcagccaaggctttgcttgccatggctagg
atagaagagaatcgctcagaatttgttttatatgagggccgcttgctagatatttctata
tcatctgttctgaactctatggttgcatctgtcatttgtgatacactgttcatgattggt
caattatga
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integrated database retrieval system
