Hemiscyllium ocellatum (epaulette shark): 132819822
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Entry
132819822 CDS
T09720
Symbol
afdna
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04517
IgSF CAM signaling
hoc04519
Cadherin signaling
hoc04520
Adherens junction
hoc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
132819822 (afdna)
04519 Cadherin signaling
132819822 (afdna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
132819822 (afdna)
04530 Tight junction
132819822 (afdna)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RA
AFDN
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RA_3
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
132819822
NCBI-ProteinID:
XP_060687635
LinkDB
All DBs
Position
10:80535694..80760276
Genome browser
AA seq
1913 aa
AA seq
DB search
MSSREEERTKLAEIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKVAGNFATKCIRV
SSTATTQDVIETLAEKFRPDMRMLSSPRYSLYEVHVSGEERRLDQDEKPLVVQLNWNKDD
REGRFVLKNENAFLPPKKSQSNGPEKEKEGVIQNFKRTLSKKEKREKKRREKEALMQTVD
DDRPISSGDGENSSSHLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEQRMQEFRSGD
GRPDSGGTLRIYADSLKPNIPYKTILLSTTDTSDFAVGEALDKYGLEKENPKEYCIARVV
LPPGVQQSDDKGAKETLLDDDECPLQIFRDWPSDKGTLVFQLKKRPSEHIPKNGRKQDGR
LPKGKERNDNSGYGSSLPPEKLPYLVELSPDGSDSRDKPKLYRLQLNVTDVGTEKSDENS
IQLFGPGIQPHHCDLTNMDGIVTVTPRSFDAETYVDGQHITETTMLQSGMNIQFGSSHVF
KFVDPAQNHVSMRPMDAGPMVKGQRIKSGQGSRSVQETTFDLDGDIHSGMPLTMSKSSDR
LDSEHTVSSSSSSERNVVKPIVRVEQQDYYKQEIRPQDVQGHELTLPATIEFRESSEDSF
LSAVVNYTNSSTVHFKLSPTYVLYMTCRYVLSSQYRPDMSPSERTHKVIAIVNKMVSMME
GVIQDIAQYEQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFK
YLVHCLQSDLNNYIPAFLEDPEEASPQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFS
QLFHFINMWLFNKLVTEPDSCLCSHYWGAIIRQQLGHIEAWAEKQGLELAADCHLSRIVQ
ATTLLTMDKYLAEDISNINNTCFKLNSLQLQALLQSYHCAQDEPYIPQELIENVVALAEN
TADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGLQEFLEPLCQRGFCRLT
SHSRSPGTWTVYFESADYESNFPLDTELTEPNRKEPEIITVTLKKQNGMGLSIVAAKGAG
QDKLGIYVKSVVKGGAADLDGRLAAGDQLLSVDGRSLVGLSQERAAEFMTRTGSVVTLEI
ARQGAIYHGLATLLNQPSPMMQRASDRRGTGKPRPKSEGFELYNNNPQNGTPENSPMGWT
EYSEPKKPPGDDRLLKNRADHRSSPNVANQPPSPGVKPVYSTAPTSKIQSVSTGNLCAEE
QVLPTRPEAYPIPTQTYAREYFTFPTSRSQDRVSPVPGQWQHYDDRTMMQEQTFSGTVQR
GTRSQEELHETKAFHTEKLRQEDMLRRDTEYQKDLDRKPDVWAHQISSMDSSVSGQEQLN
YSSKSLPPTAIAPHKSGPGRWKTPAPNQATPVAVSQPIRMENQLPPPPPPPPVHYAVDFD
NSHSDLPLPPPPPPPPASQGSNPSSVVDRRKREDQQRWYEKEKARLEEERDRKRREQDRK
IGQMRGPPPLHITPSQPVHVTPVIQQPRPEKMASLSRPQDTVIRELQPQQQPRTIERRDL
QYITISKEQMPGSDSLSPDPWKRDAKEKMEKQQQQHLLEMLSKEIQELQNKPDRTSEEND
RLRKLMLEWQFQKRLQESKEKDDDDEEEEDDDVDATLIMQRLEVERRARLQDEERRRHQQ
LEDIRKREAEERARQDNERHRQEEEQARRETEEKRRQEEEYYTRLEAERRRQQEEAERKL
LQPDEPGLYRPPLPRNYASETQQYEFPPPPHSSNAPPPPQRNISYMKTQIVSPDTVYTAK
FVPYNDEDEDDANLSGQDKYSVTRKSYGDLPSAPKQPPFIRQPRPVSDGYYLSNSFRPPS
ANANSTAPKAGVPLPPPTKPNFVPQSGSKGFGPYGGSTTSSIGANEVYKGPREKRPEQNK
GNGQEPEAPVVKGSPENLTFKERQRLFSHGQDISNKVKASRKLMELENELNTK
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcgcgaggaggaacgcacgaaactggcggagatcattaaccactggaatgcc
aaccggctggacctgttcgaaatcagccaaccgaccgaggatctggaattccatggtgtg
atgagattttattttcaagacaaagtagcagggaacttcgcaacaaaatgcatcagagtg
tccagcactgctacaacacaggatgtgatagagactcttgcagagaagtttcgtccagat
atgcgtatgctgtcctcacctagatattcactttacgaagtgcatgttagtggtgaggaa
cgtaggctcgatcaggatgaaaagcctttggtggtacaactaaactggaacaaggatgat
agggagggaagatttgttttgaaaaatgaaaatgcattcctgccaccaaagaagtctcaa
agcaatggtccagaaaaggagaaagagggtgtgatccagaactttaaacggacactgtcg
aagaaggaaaagagagagaaaaagaggcgggaaaaggaagcgttaatgcaaactgtagat
gatgatcgacctatttccagtggtgatggtgagaactcaagttcacatcttgcagcggag
gtatacaaagacatgccagagactagcttcacccgtacaatatctaaccctgaagtagtt
atgaaacgcagacgacaacaaaagttagaacaaagaatgcaagaatttcgtagtggtgat
ggacggcctgattcaggtggaactctgaggatttatgcagatagtttaaagccgaatata
ccatacaagaccatcttgctgtccacaacagatacgtcagactttgctgtaggagaagcc
cttgacaagtatggattggagaaggaaaacccaaaggaatattgtatagcacgggtagta
ttacctcctggtgtgcaacaatctgatgataaaggtgctaaagagactctgcttgatgat
gatgaatgtccactgcagattttcagagactggccaagtgacaaaggtactttggttttt
cagttaaagaaacggccatctgaacatatcccaaagaatggaaggaaacaagatgggagg
ttgccaaaaggaaaagaaaggaatgataattcaggctatggttcttcgttgcctcctgag
aaactgccataccttgttgaactgagtcctgatggttcagattccagagataaaccaaaa
ctgtatcgtttacaactgaatgttacagatgttggcactgaaaagtcagatgagaactcc
atccagctctttggtccaggaattcaacctcatcattgtgatcttactaacatggatggc
atagtaacagttacccctcgcagttttgatgctgaaacatacgttgatggccagcacatc
actgagaccaccatgttgcaaagtggcatgaacattcagtttgggtcatcacatgtgttc
aagtttgtggatcctgctcagaatcatgtgagcatgagacccatggatgcaggacctatg
gtcaagggccagagaattaaatctgggcaagggtcccgaagtgtccaagaaactacattt
gatctggatggcgacattcacagtggtatgccattaactatgagcaagagttcagataga
ttggatagcgagcacacagtttccagttccagttcaagtgaacgcaatgtggtgaagcca
attgtcagagtggaacaacaagactactacaaacaagagatcagaccacaagatgtacaa
ggtcatgagttgactctgccagcaacaatagaatttcgagagagctctgaagactccttc
ctgtctgcagttgttaactacaccaatagttctactgtccatttcaagctgtctccgaca
tatgtactctacatgacttgtcgatatgtcctgtctagccagtaccgacctgatatgagt
ccttctgagcgtactcataaagttattgcaatagttaacaagatggttagcatgatggaa
ggagttattcaggatatagcacagtatgaacagaagcagaagaatattgcaggtgcactt
gccttctggatggcaaatgcatcagaacttctcaacttcatcaaacaggacagagacctg
agtagaatcacgctggatgcacaggatgtcttagctcatttggtgcaaatggctttcaaa
tacttggtacactgtcttcaatcagatctgaacaattatataccagcatttcttgaagac
ccagaggaagcaagtccacaaagacccaaaatagatgatgtcttgcacacattgacagga
gcaatgtctttgttgcgccgttgccgtgtgaatgctgctctcaccatccaactgttctct
cagctttttcactttattaacatgtggctattcaataaactggtcacggagccagactct
tgtctttgttctcattactggggagctatcatccgacagcaacttggtcacattgaagcc
tgggctgagaaacagggcttggaattggctgcagattgtcatcttagcagaatagtacag
gcaaccacattattaacgatggataagtatttggcagaagacatttcaaatatcaacaat
acttgttttaagttgaattcattgcaattgcaagcgctacttcagagctaccactgtgca
caggatgagccctatatccctcaggaactaattgaaaatgtagtggcattagcagagaac
acagctgatgaacttgcacggagtgatggtagagaggtgcaattggaagaggaccctgac
ctacagctaccttttctactacctgaagatggctattcctgtgatgttgttcggaacatt
cctaatggccttcaggaattcttagaaccactttgtcagagaggtttttgtagactaacc
agtcactcacgatcacctggtacgtggacagtttattttgagagtgctgactatgaaagt
aattttccacttgatactgagttgactgagcctaatcgtaaagaaccagagataattaca
gtgacactgaaaaagcaaaatggaatgggcctaagcattgtagctgctaagggtgcggga
caggataaactcggaatctatgttaaatctgtggtgaaaggaggagctgcagacttggat
ggtcgtttggctgccggagatcaattactgagtgtagatggtcgcagccttgtgggactt
tcacaagaaagggctgcagagtttatgacaagaactggttctgtggtcactttagaaata
gcaagacaaggagctatttaccatggtttggccactctactcaaccaaccttctccaatg
atgcagcgagcctctgatcgtcgtggcacaggcaaacctcgccccaagagtgaaggcttt
gaattgtacaacaataatcctcagaatggaacaccagaaaattccccaatgggttggaca
gaatactctgaaccaaagaaaccacctggggatgataggctgttgaaaaaccgagcagat
catcgatctagtccgaatgttgcaaaccaacctccaagtcctggtgtcaagcctgtttat
tctactgcacctacctcaaagattcagtcagtctccacggggaacctttgcgcagaggag
caagtattgcctacaagacctgaagcatatccaattcccacgcaaacatatgccagggaa
tatttcactttcccaacatctagatcccaagacagagtgagtcctgtgcctggacagtgg
caacactacgatgaccgaacaatgatgcaggagcagacattcagtggcaccgtacagcgt
ggaactcgttcacaagaagaattacatgagacaaaagctttccacacagaaaaattgcga
caggaagatatgcttcgtagagatacagaataccagaaagacttggatcgaaagccagat
gtatgggctcatcagatttcctcaatggattcaagtgtatcaggtcaagagcagctgaac
tactcttcaaaatctctcccaccaactgcaattgctcctcataaaagtgggcctggacgt
tggaaaactccagctccaaatcaggctactccagttgcggtttcccagcccatccgaatg
gaaaatcagttgccaccacccccaccacctccaccagtacattatgcagttgactttgat
aattcccatagcgacctacccctaccaccgccaccaccaccaccacctgcttcacaagga
tcaaatccaagctctgtggttgatcgtagaaaacgagaagatcagcagcgttggtatgaa
aaagaaaaagcacggttagaggaagagcgggacaggaaacgccgtgaacaggacaggaaa
attggccaaatgaggggtccaccacctttgcacataactccatctcaacctgttcatgtt
actccagtaatccagcaaccaaggccagaaaaaatggctagtctatcacgacctcaagat
acagtaatccgtgaactacagcctcagcaacagcctcgcactattgagcgcagggacttg
caatacattacaattagcaaagaacagatgcctgggagtgatagtctttcacctgatccc
tggaaacgtgatgcaaaggagaaaatggagaaacaacaacagcaacacctcttggaaatg
ctcagcaaagagatacaggagttacagaacaagcctgatcgtacatctgaggagaatgac
cgtcttcgcaagcttatgcttgagtggcagtttcaaaagcggttacaggagtccaaagag
aaggatgatgatgatgaagaggaagaagatgatgatgttgatgcaacacttatcatgcaa
agattggaggtggaaaggcgggcaaggttgcaagatgaagaacgcaggcgtcatcagcag
ctggaagatatccgaaaaagagaagctgaagaaagagcaaggcaagataatgagcgtcat
cgtcaagaggaggagcaagcaaggagagaaactgaagaaaagagaagacaggaagaagaa
tattatacacgtttggaagctgaaaggcgtagacaacaggaagaagctgagaggaagttg
ctgcaacctgatgaacctggtctgtacaggcctccccttccaaggaactatgcttctgaa
acccagcagtatgagttccctcccccaccccattcatctaacgctcctccccctcctcaa
agaaacatctcttacatgaaaacacagatcgtctcccctgacacagtttacactgccaag
tttgtcccatacaatgatgaggacgaggatgatgcaaatctttcaggtcaggataagtac
tccgtcacaagaaaatcgtatggtgatctcccttctgcccctaagcagccgccattcatt
cgtcaaccccgcccggtttcagatggctactatctttcaaactcattcagaccaccatct
gccaatgccaacagtactgctccaaaagctggtgttccccttccccctccaaccaaaccg
aacttcgtgccacagagtggttcaaaaggatttggtccttatggcggatcaactacaagt
agcattggagcaaatgaagtttacaaaggcccgagagagaagcgtcctgagcagaataaa
gggaacggccaagagccagaagcaccggttgtgaaaggatccccagaaaatctaacattt
aaagaacgtcagcgtcttttctcacatggacaggacatttctaacaaagtgaaggcatca
cgaaaactgatggaactagaaaatgagctaaacacaaaataa
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integrated database retrieval system
