Hemiscyllium ocellatum (epaulette shark): 132820026
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Entry
132820026 CDS
T09720
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132820026 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132820026 (nup54)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132820026 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
ToxA_N
Motif
Other DBs
NCBI-GeneID:
132820026
NCBI-ProteinID:
XP_060687934
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All DBs
Position
1:129811768..129879733
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AA seq
551 aa
AA seq
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MAFSLGGGSSGTTGFSFGSFGAKTTAQPTFGFGTTTTTAASGFGGFGTFGTTTTTSGQTA
GFPFGASTGGFGGFGTTTTAAPAFNFSATPANTGVTGLFQNTPNKGFGFGGFSTGTGTGL
TTGLAAGSTFGGFGGFGTQQQQQAGGLLGQAIQPPTQSAQLINTASALSAPTLLGDERDA
ILAKWNQLQAFWGTGKGYFHNNLAPVEFTQENPFCRFKTVGFSCIPSNKDEDGLVALAFN
KKEADIRNQQQLIVESLHKILGGLPQIMVNVEGIRALPDDQTEMVIYVVERFPNGNSRRV
SVTNLYSSLEQATVKSHLMQLGVIVTLPRTELSPAQMKQLLQNPPAGVDPIIWEQAKVDN
PDPEKLIPVPMVGFKELLRRLKFQEQMTKQHQSRLDIISEDVNELQKNQATTVAKIAQYK
RKLMDQAHKVLQVLIKQEIQRKAGYAIQAEEEQLRVQLDTIQSELNAPTQFKGRLNELMS
QIRMQNHVGAVRSEERYSVDGDLLGEIKQHLKLQQEGLTHLISVLKEDLEDVKLIEQGLN
ESIHVRRDIFS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagtttgggcggtgggagctccggaaccactggattttcttttggttctttt
ggtgccaaaaccacggcacagcccacttttggtttcggaaccaccaccacaacagctgct
tcaggatttggaggttttggcacatttgggaccacgaccaccacaagtgggcaaacagca
ggatttccttttggagcatcaacaggtggttttggagggtttggcacaaccacgacagct
gctcctgctttcaatttctcagcaacacctgccaatacaggggtaacaggcctattccag
aacacgccgaataaaggctttgggtttggtggttttagcacgggtactggcacaggtctg
acaaccggcttagcagctggttccacatttggagggtttggtggctttggtactcagcaa
cagcagcaagctggaggacttcttggacaggcgatacagcctcccacacagtcagctcaa
ctgatcaacacagcaagcgcactttctgcaccaactctactgggggacgagcgcgatgct
atattggcaaagtggaaccagctacaggcattctggggaactgggaaaggttacttccat
aataatctggctcctgtcgagttcactcaagaaaaccctttctgtcggtttaagactgtt
ggtttcagctgcatacccagtaataaggatgaggatggtctagtagctttggcttttaac
aaaaaagaggcagacattcgaaaccagcaacaattgatcgtagaatctttgcacaaaatt
ctcggagggttgccacaaatcatggtgaatgttgaaggaatccgagcactgcctgatgac
caaacagaaatggtgatctatgtcgttgaacgttttccaaacgggaattccagaagagtt
tcagtgacaaacctctacagctcgctggagcaagctaccgtaaagagtcatctgatgcag
ttaggagtgattgtcacattgcccaggacagaactgtctccagctcagatgaagcaactt
ctacagaatcctcctgctggtgttgatccaataatttgggagcaggctaaagttgacaat
cctgatcctgaaaagcttataccagtgcccatggttggttttaaagaattgctgaggagg
cttaagttccaggaacagatgacaaaacagcatcaaagcagattggatattatatcggag
gatgtaaatgagctgcagaagaaccaggctacgactgtagcgaagatagctcagtacaag
cgaaaactaatggaccaagctcataaagtcttgcaagtgctaataaagcaagagatccag
aggaaagcaggttatgcaatacaagcagaagaggaacagcttcgtgtgcagctagatacg
atccaaagtgagctaaatgcacccacccagtttaagggccgtttgaacgaactgatgtct
cagataagaatgcagaatcatgttggagctgtcagatcagaagagagatacagtgtggat
ggcgatctcttgggcgaaatcaagcagcacctgaagttgcagcaggaaggtctgactcat
ttgatcagtgtcctgaaggaagatttggaggatgtgaagctaattgagcagggccttaat
gagagtattcatgttcgccgtgacattttcagttga
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