Hemiscyllium ocellatum (epaulette shark): 132820171
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Entry
132820171 CDS
T09720
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132820171 (zc3h12b)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
132820171 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
132820171
NCBI-ProteinID:
XP_060688113
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All DBs
Position
11:37367816..37463187
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AA seq
956 aa
AA seq
DB search
MLDFVIPLSASGRLENLIPHIERLFRVKISAGPAAESSRWVHIEQAAETQEGLRKAKDYI
LSLCSPEHKKCENITSTLRKQLIELKDTIEYESQAVLEIKEKSVEITGGQINVMTAWSMF
EKLNMENNSSKEAKSLHLEIGDCSADSEDWTSSESDSEQPPNKKEGTPIVSKPHRQLCRS
PCLERPVLSKCSVLQEFQSEDRKSKFDDDDDDKAASLDKEYQAKMEFALKLGYSGEQIQT
VLNKLGSDALINDILAELVRLGNKSESEPQPPSVGNTGTLVSRGQCMKEVTSPELSLEDE
VVDDSDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAAEYFLEKGHKDITVFVPAWRKEQS
RPDAPIKDQELLRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYR
DLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPVIPEHKKQPCP
YGKKCTYGHKCKYYHPERVNQPQRSVADELRASAKLSAVKTMSEGALAKCGIAISGVKGE
NISEIKRVAPKRQSDPSIRSVVCEPEERLTPSRRLETNSVPSLVTASSVPTFQQNKNHAA
SAMSTRSASSPVPCSKQFTHQKSSQEHLSTLNYPPILVTNSHGNSVSYTEQYPKYDSTLD
TGYYSMINDFSNLSISSMRNHDGYYGLESDHGLYPRNTSPHTETCITSNDSYSSYSDLAY
LGTVEPGPEDNVKTHQPQSQNRLQPFVHGYHEPITRVQSYGSEESKQPQRKQSISHLVPH
IQHSAAGARSSCPGDYPVPQNIHPSANNQPGRALVMTRLDSISDSRLYESNPMRQRRPPL
CREQHTSWDHLPCVTDSYRYPSYPLTNNLMQPSYEPGMFRSMPEKIEQIWRSPWQGMPNE
QQDHLAIREHQYQTYRNLCNIFPADIVHAVMEKNPHVTDPQHLAAEIVAKQLRSGR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgctggatttcgtgatcccactgagtgccagcggtaggctggagaacctcatccctcac
atagagaggctcttcagggtgaagatcagcgctgggcctgcggcagaaagcagcagatgg
gtccatatagagcaggcagcagagacacaggaggggctcaggaaagcaaaggattatata
ctatcactgtgctccccagaacataagaagtgtgagaacataacatcaacattacggaaa
cagttaattgagctgaaagataccattgaatatgaaagtcaagctgtactggaaataaaa
gaaaaaagtgtagagataacaggaggacaaattaacgtaatgactgcctggtcaatgttt
gagaagttgaatatggagaacaactcctccaaagaagccaagagtcttcatctggagatt
ggtgactgcagtgctgattctgaggactggacaagctcagaaagtgattcagaacaacct
ccaaataagaaggaagggactccgattgtgagcaaaccacaccggcagctctgtcgctct
ccttgccttgaacggccagttctatccaaatgcagtgtcctacaggaatttcagagtgaa
gacaggaaatccaaatttgatgatgatgacgacgacaaggctgccagtttagataaggaa
taccaggccaaaatggagtttgccttaaaactaggatattcaggagaacagatacaaaca
gttctcaataaactgggatcagatgctcttattaatgacattttagctgagctggtcaga
cttgggaacaaaagcgaatctgagccacagcctcccagtgtaggtaacacaggtacccta
gtgtccaggggccagtgtatgaaagaggtcacaagcccagagctgtccttagaagatgaa
gttgtggatgattctgacaatttgagacctatagtcatcgatggaagtaacgtggccatg
agtcatggtaacaaggaagtgttctcttgtcgtgggattcagttagctgcagaatatttc
ctggaaaaaggacacaaagatatcacagtgtttgttcctgcttggcggaaagaacagtcc
aggccggatgcacccattaaagatcaagaactactacgaaaacttgagaaagagaaaatt
ctggtcttcacaccatcccgacgagtgcaggggaggagagtggtgtgctatgatgatcga
ttcatagtgaaattggcctttgactctgatggcattattgtgtcaaatgacaactataga
gatctacagaatgagaaaccagagtggaagaaatttatagaagaacgtcttctaatgtat
tccttcgtgaatgacaagttcatgccacccgatgatcctttaggacgtcatggtcccagt
ctggataacttcctgcgaaagcgtcccgttattccagagcacaagaaacagccttgtcct
tatgggaaaaagtgcacttatggacacaagtgtaaatactatcatccagagcgtgtgaac
cagccacagagatcagttgctgatgagcttcgtgccagtgctaagttgtctgctgtgaaa
actatgagtgaaggagccctggcaaaatgtggcattgccatatcgggtgtgaaaggagaa
aacatttctgagattaagcgtgtcgctccaaagcgccaatctgaccccagcatacgatct
gtagtttgtgagccagaggaacgattgacaccatctcgcagacttgagactaactctgtg
ccttctttggttactgcatcgagtgtacctacatttcaacagaataaaaatcatgcagcc
agtgccatgagtacccgatctgcaagcagtccagtgccatgttccaaacagttcactcac
cagaaatcctcacaagagcatttatccactttaaattatccacctattcttgtaaccaac
agccatggaaactctgtgagttatacagaacagtatccaaaatatgattcaactttggac
actggctactactctatgataaatgacttctcaaatttaagtatcagcagtatgcggaat
cacgatggctattatggattggaatcggatcatggtttgtatccaagaaacactagtcct
cacacagaaacctgcattacaagtaatgattcctattcttcatacagtgacctggcgtac
ctaggcactgtggaaccaggtccagaagataatgtgaaaacccatcagccacagtcacag
aataggctgcaacctttcgttcatggctaccacgaacctataacaagagtgcagagttat
ggctcagaggagtcaaaacagccccagcgtaaacagtctatctcccatttagttcctcat
atccagcattctgctgctggagctcgttccagctgtcctggggactatcctgttcctcaa
aacattcatccatctgctaataatcagccaggacgggctctggtaatgactaggctggac
agcatttctgattcacgactgtatgaaagtaatccaatgagacaacgaagacctccactc
tgcagagagcagcatactagctgggatcacctaccatgtgtcacagattcctatagatac
ccttcataccctttgactaataatctcatgcaacccagttatgaacctggtatgtttaga
agtatgccggaaaagatagagcagatctggaggtccccctggcagggaatgcccaatgag
caacaggaccatctggcaatccgggaacatcagtatcaaacgtatcgaaacctctgtaac
atcttcccagcagacatagttcatgcagtaatggaaaagaatccccatgtaactgacccc
cagcatcttgctgctgagattgttgctaaacaactacgttctgggcggtaa
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