Hemiscyllium ocellatum (epaulette shark): 132820357
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Entry
132820357 CDS
T09720
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132820357 (fmr1)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132820357 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
132820357 (fmr1)
mRNA cycle factors
Stress granule specific factors
132820357 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXMR_C2
KH_1
Agenet
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-GeneID:
132820357
NCBI-ProteinID:
XP_060688383
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All DBs
Position
11:10079768..10149466
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AA seq
574 aa
AA seq
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MEDLMVEVRGSNGAFYKAFVKDVHDEALTVAFENNWQPERQIPFHDVRFPPPADYHKDIN
EGDDVEVYSRANEKEPCGWWLAKVRMMKGEFYVIEYAVCDATFNEIVTVERLRPINPNKP
ATKSTFHKVKLDVPDDLRRACANESAHKDFKKAVGAYCVYFDSESNQLVVLSTNEMTAKR
ASMLSDMHFRSIRTKLTLMLRNEEASKQLESSRQLASRFHEQFVVREDLMGLAIGTHGAN
IQQARKVPGVTAIELDEETCTFHIYGEDQEAVKQARNYLEFTEDSVQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEGDGDKKIPREEGMVPFVFVGTKESISNARVLLDYHLNYLKE
VDQLRMERLQIDEQLRQMGAGLRTPANRPDKERGYSTDESTSYLRGGRPYSSRGRGRRGP
GYASGNNSEASNASETESEHRDELSDWSLAPTDEEREPYSRRGDSRRRGSAGRGRGGGRG
RGSNKNPSSTSDEFLRADIRKRNSSRDSKTRTTDGSLQIRIDSNNERSVVSKASHSPNVF
GESTRQRAGKERAQKKEKPESPTDNQQVLVNGVS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggaggatttaatggtggaagtgcgcggctctaatggagccttttataaggcatttgtg
aaggatgtgcatgatgaggctttaactgttgcttttgagaacaattggcagcctgagcgg
cagattcctttccatgatgttcgatttccaccaccagcagactatcacaaagacattaat
gaaggcgatgatgttgaggtgtattctcgagcaaatgaaaaagaaccttgtggctggtgg
ctggcaaaagttagaatgatgaagggtgaattttatgttatagaatacgccgtctgtgat
gccactttcaatgaaatagtcacagtggaacgactacgacctattaaccctaataaacct
gcaacaaaaagcacattccacaaagtaaagcttgatgttccagatgacctgaggcgtgca
tgtgccaatgaatctgcacataaggattttaaaaaggctgttggcgcttattgtgtgtac
tttgattcagaaagtaatcaactagttgttttgtccaccaacgaaatgacagcaaagcga
gcaagcatgttgagtgacatgcatttcagaagcatccgtacaaagttgacactgatgttg
aggaatgaagaggccagcaagcagctggagagctctcgacagcttgcgtcacgtttccac
gagcagtttgttgtacgagaagacctcatgggtctcgccatcggtactcatggagccaac
atccagcaagctaggaaagtgccaggcgtcactgcaatcgaactggatgaagagacttgc
actttccacatctacggtgaggaccaggaggcagtcaagcaagccagaaattatctcgag
ttcacagaagactctgtacaagtaccgaggaatctagtaggaaaagtaataggcaaaaac
gggaagctcatacaagaaattgtagacaaatcgggagttgtccgagtgagaattgaagga
gatggtgacaaaaagattccacgtgaagagggcatggttccgtttgtgtttgttggaaca
aaggagagcataagcaatgcacgtgttctattggactaccatctgaactatttaaaggag
gttgaccagctacgcatggaacgcttacaaatcgacgagcaacttcggcagatgggtgcg
ggattgaggacccccgcaaaccgtcccgacaaagaaaggggctactcgactgatgaaagt
acaagttacttgcgagggggcagaccttacagtagtcgagggcgtggcagacggggccca
ggctatgcatcaggtaataactctgaggcgtccaatgcctctgagactgagtccgagcac
agagatgagctgagtgattggtcactggcgccaacagatgaagaaagggaaccatactca
cgccggggtgacagtcgcaggagagggagtgctggcaggggccgtggtggaggtcgaggc
cgtgggagcaacaaaaatccctcatcaacttcagatgaattcttgagggcagatatccgt
aaacgcaactcatcacgagattcaaaaaccaggacgacagatggctcattgcagatcaga
attgacagcaataatgaaaggagtgtcgtgtcaaaagcttcccacagcccaaatgttttc
ggcgagagcactcgacagcgtgcgggcaaggaacgtgctcagaagaaagagaagccagaa
agtcccacggacaaccagcaagtgctggtcaatggagtatcttaa
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