Hemiscyllium ocellatum (epaulette shark): 132820389
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Entry
132820389 CDS
T09720
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132820389 (rlim)
Enzymes [BR:
hoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132820389 (rlim)
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132820389 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING-like
zf-RING_4
zf-HC5HC2H
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
132820389
NCBI-ProteinID:
XP_060688449
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All DBs
Position
11:complement(23289880..23347222)
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AA seq
666 aa
AA seq
DB search
MENAANEDGGNDQADTQSSNEDQRRRQSDRLDREEAFYHFVNNLSEEEYRLMRDNNLFGT
PGEVTEEELSRRLQQVKDGVIQNNPDTWRSEGSGDNRGTEGSEEGSSGDSLLEWLNAFRQ
TGNTTRSGQSGNRSWRAVSRTNPTSGDFRFSLEINVSRSRIDQSAEMESEQPMDTSNVEA
TVPAAEEAVTPVPSGNTSAPSPTATQPPPPPPPVTDPPTAMAEDDVQNEPERSASTGTRR
SRGPSGELSYENRYELLRHELETQAQHQGRPRSGRSRSPERRRSSRTRSNRSRSPLHQVS
EGTSRSRRQGLSQRSDRSVSESGTEGSSRTRQHVMSRQSRVGDGVQSEITNHVPVLEPNE
PRETSQEAADSSEAVVSDPSVAGRRPPTIMLDLQVRRVRPGENADRDSIANRTRSRSQTS
DNTVVYESERGGLRRTFSRSERAGVRTYVSTIRIPFRRISDSGLGEAASVALQTILRRIM
MGGELSSFVDSDSDSESSNRGQSQVQDVSESQDSINESPGMASEGRTGEQQAGEQRNGSE
TDSITGARRREGQQSRGLFGLEESGTLPILRLAHFFLLNDEDEDDQPRGLTKEQIDNLST
RNFGESDAIKTCSVCISEYTAGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRQAVLVRT
TGESVG
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgctgctaatgaagatggaggaaatgatcaggctgatactcagtcttctaac
gaagatcagcgcaggcgtcagtcagaccgcctggatcgggaggaagccttctatcatttt
gtcaataacctgagtgaagaggagtacaggctgatgagggataataacctgtttggtaca
ccaggggaagttacagaagaggaacttagcaggcgtttacaacaggtgaaggacggcgtt
attcagaacaacccagatacttggagaagtgaaggctctggtgacaacagaggtactgag
ggttcagaagaaggatcaagtggagattctcttctcgagtggttgaatgcttttaggcag
acggggaacacaacgagaagtggtcaaagtgggaatcgttcctggagagcagtcagtcgt
acaaacccaacaagtggtgattttagattcagcttggaaattaatgtcagtcggagtaga
attgaccaaagtgctgaaatggaaagtgagcaacctatggacacttcaaatgtggaagcg
acagtacctgcggcagaagaagcagtgaccccagtaccatccggaaatacaagtgcaccc
tcaccaacagcaacgcaaccaccaccaccaccaccacctgtaacagatccaccaacggct
atggcagaagatgatgttcagaatgaacctgaaagatctgcttccactggaacaagacga
agtcgaggaccaagtggagagctatcttatgaaaacagatatgaacttttgagacatgag
cttgaaacccaagctcaacatcaaggtcgcccaagaagtggtagaagtaggagtccagag
cgccggaggtcatctagaacgaggagcaatcgaagtcggtcacccttgcatcaagtcagt
gaggggacgagtagatcacggcgtcagggactttcccagaggtctgatagatctgtttca
gaaagtggaacagaaggaagttccagaactagacagcatgtcatgtccagacagagtcgg
gttggagatggggtgcagtctgaaataacaaatcatgttcctgttcttgagccaaatgaa
cctagagagacttcccaggaagctgctgactcttcagaagccgtcgtcagtgatccctct
gtagctgggcgccgaccaccgaccattatgttagacctgcaagtgagaagggtgagacct
ggtgaaaatgcagatagagatagcatagctaacaggacccggtcacgatcccaaacatcc
gacaacactgttgtatatgaaagtgagcggggtggcctcaggcgcacattctcccgctct
gaacgagcaggggtgcgaacttatgtcagcaccattcgtattccttttcgcaggatatct
gattcaggtcttggagaggctgcctcagttgccctccaaacaatactacgccggataatg
atgggtggggaactgagttcctttgtggacagtgacagcgattctgaatctagcaacagg
ggccaaagtcaagtgcaggatgtttctgaatcgcaagacagtataaatgaatccccaggc
atggcttctgaaggcagaacgggtgagcaacaggcaggggagcagcggaatggcagtgaa
acagatagcataactggagctaggagaagagaaggtcagcaatctcgaggcttatttggt
cttgaagaaagtggtactttgcccatacttaggcttgctcatttctttctgctcaatgat
gaagatgaggacgatcagcccaggggactgactaaagagcagattgataacctgtccacg
agaaattttggagaaagtgatgcgattaaaacctgcagtgtgtgtattagtgaatacaca
gcaggaaacaagctgcgcaagctaccctgctctcacgaatatcacgttcattgtatcgat
cgctggctgtccgaaaactccacatgtcccatttgccgtcaggctgttttagttcgcacc
actggtgaaagtgttggctag
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