Hemiscyllium ocellatum (epaulette shark): 132820407
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Entry
132820407 CDS
T09720
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03013
Nucleocytoplasmic transport
hoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132820407 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
132820407 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132820407 (thoc2)
03041 Spliceosome [BR:
hoc03041
]
132820407 (thoc2)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
132820407 (thoc2)
Spliceosome [BR:
hoc03041
]
Complex C
Other components
EJC/TREX
132820407 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132820407 (thoc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
132820407
NCBI-ProteinID:
XP_060688487
LinkDB
All DBs
Position
11:complement(31718513..31863278)
Genome browser
AA seq
1600 aa
AA seq
DB search
MAVMVFHGDWLKNWEKGGKTDFVQLCRSLSENRGYNDVTFKDIQQVLYELAWHVIKGNLK
QEQAASALSDVMELRDDMSSILADVFCVLDIETSCMEEKSKRDHFTQLVLACLCLVSDTV
LKERLDPETLESLGLVKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYGKLFTELGQD
LSGNLTSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEHDDFFVPLIESYMCMCELQ
TLCHILGFKFKFYQEPNGETPPSLYRVAAILLQNNLVELDDLYVHLLPLDANILEHHKRE
IVEAKQIARKLTLVVLSADKPDEKEKEKEEEKNEKPPDNQKLGLLEALLKIGDWYHAQCI
MDQIPPFYATAHKSIALALCQLIHVITEPLYRRVGVPKGAKGAVIPSLKNERAPKPVETF
EDLRKEVFSMLCYLGPHLWHDPILFAKVVRIGKAFMKEHSSDGNKPDDKEKMDSLVSCFL
SITDQVLLPSLTLMDSNACMSEELWGMLKTFPYQYRYRLYGQWKNDTYSSHPLLVKVKAQ
TIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYL
TSLNYDVLAYCIIEALANPEKERMKHDDTTISTWLQSLASFCGAIFRKYPIELTGLLQYV
ANQLKAGKSFDLLILKEVVQKMAGIEITEEMTTEQLEAMTGGEQLKAEGGYFGQIRNTKK
SSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFL
ASNLSTEDYIKRVPSIDVLCNQFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQQ
KVHKYINACELVMAPVHDAVVSLHPPKVWDDISPQFYATFWSLSMYDLAVPSSSYDREVN
KLKVQMKAIDDNQEMPLNKKKKEKERCTALQDKLQEEEKKQLEHAHRILQRLKLEKDNWL
LAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAKFVELVHQLKTPNFSTLLCYDRVFSDI
IYTVASCTENEASRYGRFLCSMLETVTKWHSDRTIYDKECGNYPGFLTILRASGFDGGNK
ADQLDYENFRHVVHKWHYKLTKASVHCLETGEYVHIRNILIVLTKVLPWYPKVLNLGQAL
ERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPYMVPENEFHHKDPPARSATPATVQNG
PGTVTQPAAATTNAAKAEEGTNEETADKLKEKSQSAIKVTNKAANATPKVTASNGSNAVN
SNKVTKEKEEKEKSGKERDKEKTILAVPPEAKTTVKDAKEKLKEERANKEEKVRETKEKT
PKAEKEKEKEKIRKEEKTAKDDKSRSTSSCPEAKPHSEKEKEKEPSKERDALKEAKSKES
HTGTKGEKAAAAGSLKSPVPRSESSESEREQKRRKLDSHSSPSHSTTVKDGLGDHKESSA
KHHSPHHTNHSTGTQSKSKEREVEKKEVEKLRDRSREREKKEDKERKDRKRDHSNSDREN
IQESKRRKDENGTGGSGKRSKSASPADSPRSTEKEKNKSSKSSSGKDRDKNDSIKLEKLE
KSSTTSKKESRHDKGDKKEKRESGGLKEDKKHHKSSEKHR
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgatggtgttccatggcgactggttgaagaattgggagaaagggggcaaaacg
gattttgtacagttatgtcgcagtctttctgaaaatcgaggctacaatgatgtaacattt
aaagatattcaacaagttttatacgagttggcgtggcatgttataaagggcaatctaaaa
caagaacaagctgccagtgctctcagtgatgtaatggaacttcgagatgatatgtcatcc
atcctggctgatgttttctgcgttcttgatattgaaacaagttgcatggaagagaaaagt
aaaagagatcattttactcaactggttttagcatgtttgtgtttggtttcggatacggtt
ctgaaggaacgacttgatccagagacgttagaatctcttggacttgtaaagcaatcacag
cagttcaaccagaaatctgtcaaaatcaaaaccaaactattttataagcaacagaagttt
aatttgttacgagaagaaaatgaaggatatggaaaactttttactgaactgggccaagac
ttatctggaaacctcacaagtgacctaatactagaaaacatcaaatcacttataggttgc
tttaatctggatccaaacagagttttggatattatcctagaagtttacgaatgtaggcca
gaacacgatgacttttttgtacctttgatagaatcctacatgtgcatgtgtgaactacag
actctttgtcatatcttgggattcaaatttaaattttatcaggaaccaaatggagaaaca
ccgccttcactttatcgggtagctgcaatactactacaaaacaacttggtagaacttgat
gatctttatgtgcacctccttccactggatgccaatattctagaacaccataaacgtgaa
atagttgaagctaagcaaattgcacgaaagcttactctggtagtactctctgcagataag
ccagatgagaaggagaaggagaaggaggaagaaaagaatgaaaaacctcctgacaatcag
aaacttggattattggaagctcttctaaagattggtgattggtatcatgcacagtgtatc
atggatcaaataccacctttttatgccacagctcacaaatctatagcacttgctctctgc
caattgattcatgtcattactgaacccttatatagaagggttggtgtaccaaagggtgcc
aagggagcagtaattccatcacttaaaaatgaaagggctccaaaaccagtagaaactttt
gaagacttaagaaaagaagttttcagtatgctatgctaccttggacctcacctatggcat
gatcctatcttgtttgctaaagtggttcgtataggcaaagcattcatgaaagagcattca
tcagatggcaataaaccagatgacaaggaaaaaatggattcacttgtgagttgtttcctc
agtattacagatcaagtgttgctgccatctcttacattaatggactccaatgcatgtatg
tcagaagagctttggggaatgttgaaaacattcccataccaatacaggtaccgtttatat
ggacagtggaaaaatgacacctacagtagccatcctctactggtcaaagtcaaagctcag
actattgacagggccaagtatattatgaagcgattgactaaggaaaatgtcaagccttct
ggaagacaaattggaaagctgagtcatagtaatccaactatcttgtttgattatatttta
tcccagattcagaagtatgacaacctaataacacctgttgtggattctttgaaatacctc
acttccttgaactatgacgtcttggcatattgcatcattgaagctctggccaatcctgag
aaagagagaatgaagcatgatgacaccaccatctctacctggttgcagagtctggcaagt
ttttgtggtgccattttcagaaaatacccaatagaacttactggtcttctgcagtatgtt
gcaaaccaactaaaagctgggaaaagttttgatttgctgattctaaaagaagtggtgcag
aagatggctggtattgaaattacagaggaaatgacaacagagcaattggaagccatgact
ggtggagagcagttaaaagcggagggtggttactttggacagattaggaacacaaaaaag
tcatcgcaacggctaaaagatgcattgctggaccatgacctggcacttcctctttgtctt
ctcatggcacagcagagaaacggtgttatctttcaggaagggggtgagaagcacctcaaa
ttagttggaaaattatatgaccaatgccatgataccctggtgcaatttggaggattttta
gcttcaaatctaagtacagaagactacatcaaacgagtgccttcaattgatgttctttgt
aatcagtttcacacaccacatgatgctgcgtttttcttgtcccgtccaatgtatgcgcac
cacatttcgtccaaatatgatgaactgaagaaagctgaaaaggggaacaaacaacaacaa
aaagttcacaagtatatcaatgcatgtgaattagtgatggcacctgtgcacgatgctgtg
gtctcccttcaccctcccaaagtatgggatgatatcagccctcagttctatgccacattt
tggtctctttccatgtatgaccttgctgtacccagctcaagttatgaccgagaagtaaac
aaattgaaggttcaaatgaaagcaattgatgacaatcaggaaatgccactaaataagaaa
aagaaagaaaaagaacgctgcacggctttacaagacaaactccaagaagaagaaaaaaag
cagttagagcatgcccatagaattctgcagagattaaagcttgaaaaggacaactggcta
cttgctaaatcaaccaaaaatgagaccatcacaaaattcctccaattgtgcatcttccca
aggtgtattttctcagctatagatgcagtttactgcgctaagtttgtagaattagttcat
cagctgaagacacctaacttttcaacacttctgtgttatgatcgggtcttttcggacatt
atttatactgttgcaagttgcacagaaaatgaggccagtcggtatggaaggtttctctgt
agcatgttggagacggtcactaaatggcacagtgatagaacaatatatgataaggaatgt
ggaaattacccagggtttctcacaatattacgagcaagtggatttgatggaggaaacaag
gctgaccaattagattatgaaaatttcagacacgttgtacataaatggcattacaaatta
accaaagcatctgtgcactgccttgaaactggcgagtatgttcatatccggaacatattg
atcgtgttgactaaagtcctcccttggtatcccaaagtattgaatctcggtcaagcattg
gagcgaagagtgcataaaatttgtcaagaagaaaaggagaaaaggcctgatctctatgct
ctagctatgggctattctggccagttgaaaagtaggaaaccatacatggttcctgaaaat
gaattccaccacaaagatcccccagcaaggagtgcaacgcctgcaacagttcaaaatggg
ccaggcacagtcacacaacctgctgcagcaactaccaatgcagctaaagcagaagaaggc
acaaatgaggagactgcagataaactgaaggagaaatctcagagtgccattaaagttact
aacaaagctgctaatgcaacacccaaagtcacagccagcaatggaagtaatgctgtaaat
agcaacaaagtaacaaaagagaaggaagaaaaagaaaaaagtgggaaagaaagagacaag
gagaagacaattctagctgtccctccagaggcaaaaacaacagttaaagatgcaaaggag
aaattaaaagaagaacgggcaaacaaagaggaaaaagtacgggagaccaaggagaaaaca
ccaaaagctgaaaaagagaaggagaaagagaaaatcaggaaggaagagaagacagcaaag
gatgataaatccaggtcgacatccagttgtcctgaagcaaagccacactcggaaaaggag
aaagaaaaggaaccatccaaggagagagatgcactaaaggaagccaaatccaaagaaagt
cacacaggcactaaaggagaaaaagcagctgctgctgggtccttgaagtccccagttcca
cgttcagaatcttcagagtctgagagggaacaaaaacgacgcaagcttgattcccactct
tcaccgtcacattccactactgtaaaggatggtctcggagatcacaaggaatcttcagca
aagcaccatagccctcatcacaccaaccatagtacaggcacacagtcaaagagcaaagaa
agggaggtggagaagaaagaggtggagaagttgagggatcgctcaagagagagagaaaag
aaagaagacaaagaaagaaaagatcgcaaaagggatcattcaaacagtgatcgagagaat
atacaagaatcaaagaggcgtaaagatgaaaatgggacaggtggctctggaaaaaggagt
aaaagtgcaagtcctgcagattccccacgttcaactgaaaaggagaaaaataagagttca
aaatctagctctggtaaagacagggataaaaatgattccatcaagctagaaaaactagaa
aagagttcaacaacaagcaagaaggaatctagacatgataaaggagacaaaaaagagaag
cgcgagagtggaggtttgaaagaagacaaaaaacatcataaatcatcagaaaaacataga
taa
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integrated database retrieval system
