Hemiscyllium ocellatum (epaulette shark): 132820418
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Entry
132820418 CDS
T09720
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03420
Nucleotide excision repair
hoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132820418 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
132820418 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132820418 (cul4b)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132820418 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hoc04147
]
132820418 (cul4b)
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
132820418 (cul4b)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
132820418 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
132820418 (cul4b)
Exosome [BR:
hoc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132820418 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
DUF3399
Motif
Other DBs
NCBI-GeneID:
132820418
NCBI-ProteinID:
XP_060688508
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All DBs
Position
11:38349559..38435710
Genome browser
AA seq
842 aa
AA seq
DB search
MFRTGLSSQNSPQEVRQQADVSPRKRKLAEAGEFEHHQHQTPQPTQLFPSAAPKSSSSTS
STSTCCNHQLQKRVKFEDSLDFVGLDVMMAEEQRKSSGCSVLTGHANGLTKSTTFANSKP
GTAKKLVIKNFKDKPKLPDNYTNETWQKLKEAVEAIQKSTSIKYNLEELYQAVENLCSYK
VSANLYKQLRQVCEDHIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLD
RTYVLQNSMLPSIWDMGLELFRSHVISDRKVQNKTIDGILLLIERERNGEAIDRSLLRSL
LSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRVITY
LDQSTQKPLIATVEKQLLGEHLPAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLL
QHWIEYIKTFGSTIVINPEKDKTMVQELLDFKDKVDHVVDVCFLKNEKFVNAMKEAFETF
INKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDL
AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFRDMELSKDIMIQFKQYMQNQNI
PGNLELTVNILTMGYWPTYVPMEVHLPLEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCV
LKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKTATGIEDGELRRTLQSLACGKAR
VLTKTPKSKDVEDYDKFTCNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQID
AAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENTNQYNY
VA
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaacgggcctctcttcacaaaattcaccgcaggaggtgcgacaacaggctgat
gttagtccgaggaagcgaaagttagccgaggccggcgagttcgaacaccaccagcaccaa
acacctcagccaacccagctcttcccctccgcagcccccaagtcttcctcctctacctcc
tccacctccacctgctgcaaccaccagcttcagaagagagtcaagttcgaggactcgcta
gactttgttggactcgatgtgatgatggcggaggagcagaggaaaagcagcggctgttcc
gtgctcacggggcatgctaacggcctgaccaaatccactaccttcgccaacagcaagccg
gggacggctaaaaaattagttattaaaaatttcaaagacaaacctaagttgcctgataat
tataccaatgaaacctggcaaaaactgaaagaagcagtagaagcaattcagaagagcacc
tcaatcaaatacaatttggaggaactttatcaggcagtggagaacctctgttcttacaaa
gtatcagcaaatttatacaagcagctgcgacaagtctgtgaggatcacatcaaagctcaa
attcaccagttcagagaggattccttagatagtgtcctgtttctaaagaaaatagataaa
tgctggcaggaccattgcagacaaatgatcatgattaggagtatcttcttgtttctggat
agaacttatgttctacaaaattcaatgcttccatctatttgggacatgggccttgaatta
ttcagatcccatgtaataagtgatcggaaggttcaaaataaaactattgatggaattctt
ctcttaattgagagggaaagaaatggtgaagctattgatcgtagcttgcttcgaagtctc
ttaagtatgctatcagatttgcagatatatcaagattcttttgaacaaaggtttttggaa
gaaactaatcgtctatatgctgcagaaggtcaaagattgatgcaagaacgagaggtgcca
gagtatttgcaccacgttaacaaacgtttagaggaggaagcagatcgggttatcacttat
ttggatcaaagcacacagaaacctctaatagctaccgtggaaaaacaacttctaggtgaa
catttaccagctattcttcagaaaggcttaaacaatcttctggatgaaaaccgaatacaa
gatctttctcttctttaccaacttttcagtcgagttcgaggtggagtgcaggttcttcta
caacattggattgaatatataaagacctttggcagtacaatagtaattaatcctgaaaaa
gataaaacaatggttcaagaactattagatttcaaggacaaagtggatcacgtagtcgat
gtctgcttcctgaagaatgaaaaatttgtcaatgcaatgaaggaagcctttgaaacgttc
ataaacaaaagacctaataaaccagctgaactaatagccaaatatgtagactcgaagctt
cgagctggcaataaagaagctacagatgaagaacttgagaagatgctggacaaaattatg
ataatatttaggttcatttatggaaaagacgtatttgaggctttttataagaaggactta
gcaaagcgactgttggttggaaagagtgcatcagtagatgctgaaaaatcaatgctgtcc
aaattgaaacatgaatgtggagctgcgttcaccagcaaactggaaggaatgtttcgagac
atggagctctcaaaagatattatgatccagtttaaacagtacatgcagaatcaaaatata
cccggcaaccttgagttaactgtaaatatcctcacaatgggctactggccaacttatgta
ccgatggaagttcatttacccctggagatggtaaaacttcaggagattttcaagacattt
tatcttggtaagcacagtggtagaaagttgcagtggcaatcaactttgggtcattgtgta
ttgaaagcagaatttaaagagggtaagaaagagcttcaagtgtcgcttttccaaactctg
gtactgctcatgtttaatgaaggggaagaattcagtttggaagaaattaaaactgctact
ggaatagaggatggagagttgcgaaggacattgcagtctttggcatgtggcaaagcgcgt
gtactgaccaaaactccaaaaagcaaagatgtggaagactatgacaaatttacctgtaac
gatgatttcaaacataagctgttcaggatcaagattaatcagattcagatgaaagaaacg
gttgaagaacaggccagcactactgaaagagtgttccaggacagacagtatcaaatagat
gctgctattgtccgaatcatgaaaatgagaaagactttgagccacaatcttcttgtatct
gaagtgtataatcagctgaaatttccagtcaagcctgctgatctaaagaaaagaatagag
tcattaattgacagggactacatggaaagagacaaagaaaataccaaccaatacaactac
gtggcatag
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