Hemiscyllium ocellatum (epaulette shark): 132820466
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Entry
132820466 CDS
T09720
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132820466
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hoc01009
]
132820466
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hoc04515
]
132820466
Protein phosphatases and associated proteins [BR:
hoc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132820466
Cell adhesion molecules [BR:
hoc04515
]
Cadherins
Protocadherins
132820466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
132820466
NCBI-ProteinID:
XP_060688618
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All DBs
Position
11:complement(78786383..78824962)
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AA seq
877 aa
AA seq
DB search
MDLKSTFCVDYTGSVLQKLIYIILMILCHNINSHLAIELEYKVQENESEGVFIGNVAKDI
LLTSATACGSLAYKFMKEMDYVMLKPESGELYTTKQRIDRETLCPVKFRGDPCVQQVNVV
ILCADQYLQMVKVKIVILDVNDNAPYFAEQVMKLSIPEDAATGTSFGIDYYAIDNDTGEN
SINHYYLENSQNVFGLIDYETPAIVVQQPLDREVKDLYEMKIVAVDGGVPPLSGTATLLI
NIQDINDNCPVFNASEFDIQIPENMSSNSVVTQLHAVDADLGPNAEITYSYGNRVQDVSR
KLFTLDSATGLIIFSGNKSPEIPPIHKLTVLANGPGCAPAIVQITVSVMHNSKYSPKLEI
SYIANQADGVIYLKETAPENTPIALLEVTDPDHYLKGTIYISGNVPFYLKPYERSRNKHL
VVTSQLLDHELENQYKIVIKAEDPRSLHELTIHVKIIDENDNSPEFYQSSFEASIEENNT
PGAFLLKISATDADSGKNGEVTYHLGPDALPIFSIEQLTGNVTVSTALDREKEKLYRFSV
SAVDHGIPPRKRSTIVIIHVLDQNDNIPSFLTNDYTFFIPENFPRHGEIGVINVTDLDEG
ANGDVTVSILSSSSNFLMDNTRGILRCNSSVDREKNTMHVFWVEAVDGGKPPLSATAKIT
VFVLDINDNPPTVLLPQSNISWLLVPPNTPQGTAVAEIYAIDYDAGINAVMTYTIVGRNG
PAPHVFGINTATGNITLQEKLLSKDYGLYQLLVKVSDLGQPQPLHSTVMVNLFVNETVSN
KSYLEDLLHRRTVFTEEVQTESNPCPLLQTLDIPCSPPIIPIAITMIIVSVIFFTISLCM
LLSMRKKSKKKELYIDAQIPLKINLDYYTKDWNDEQL
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaaaagtaccttctgtgtggattacacaggatcagtgcttcagaaactaatc
tacatcattctgatgatactctgccacaacataaatagtcacctggccatagaactggaa
tataaagtgcaagagaatgaaagtgaaggagtttttattgggaacgtagccaaagatata
cttttgacatcagctactgcctgtggttcactagcttacaaattcatgaaagaaatggat
tatgtaatgctcaagcctgagagtggggagctatatacaaccaagcagagaatcgacaga
gaaaccttatgcccagtcaaattccgaggtgatccttgtgtccaacaagtcaatgtggtt
attctgtgtgctgatcagtatctgcaaatggtgaaggttaagatagtcatcctggatgtc
aatgataatgcaccgtattttgcagaacaagtgatgaaactctctattccagaagacgca
gctacaggtacatcatttggaattgattattatgcaattgacaatgacactggagagaat
agcattaaccattactatcttgaaaatagccaaaatgttttcggtttgatcgattatgaa
acacccgccattgttgtccagcaaccattagacagggaggtgaaggacttgtatgaaatg
aaaatcgtggccgtggatggtggtgtaccccctttatctggaacagccacacttctgatc
aacattcaagacattaatgataactgccctgtttttaatgcatcagagtttgatattcag
attcctgaaaacatgtcctccaatagtgtggtgacacagctacatgctgtcgatgcagac
ctaggccctaatgctgaaatcacctattcttatggcaatcgtgttcaggatgtatccaga
aaactgtttaccttagatagtgccactgggcttatcatattttctggaaataaaagtcca
gagatacctcctatacataaacttacagtattggctaatggtccaggctgtgccccagct
atagttcaaattacagtgtctgtcatgcacaacagcaaatacagtccaaagttggagatc
agctatatagctaaccaggcagatggtgtgatttacctgaaggagactgcacctgaaaat
accccaattgctctcctcgaggtaactgacccagatcattatttaaaagggacaatctat
atcagcggcaatgtgcctttctatttaaaaccttatgaaaggtcaagaaataagcatctt
gtcgtcacatcacagcttttagaccatgagcttgaaaaccaatataagattgtaattaag
gcagaagatcctcgtagtcttcatgaactaacaatacatgttaagattattgatgaaaat
gacaactccccagaattctaccaaagctcctttgaggcttccattgaggaaaacaacaca
cctggagcttttttactgaagatctcagcaacagatgctgacagcggcaagaacggggaa
gtgacttaccacttgggacctgatgctttacccatcttttcaattgaacaactcacaggc
aatgtaacagtgtccaccgccctggacagggaaaaagagaaactgtacaggttttctgtt
tctgctgttgaccatggaattcctcctagaaagaggagcactattgtaatcattcatgtc
ttggaccagaatgataacataccctccttcctcaccaatgactacacattctttatccca
gaaaacttcccacgacatggcgaaattggagtcatcaatgtaacagatttggatgaaggg
gctaatggtgatgttactgtgtctatcctgagtagtagcagtaattttttaatggacaac
accagaggaatcttacgttgcaattcttcagtcgaccgagagaaaaatactatgcacgta
ttctgggttgaggcagtggatggtgggaaaccacctctttccgcaacagcaaaaataact
gtatttgttctagacataaatgataatcctccaactgtattacttcctcagtcaaacata
tcatggcttcttgtgccccctaacacaccccaaggaactgcagtggctgagatttatgcc
attgactatgatgctggcattaatgccgtcatgacttacactattgttgggaggaatggt
ccagctcctcatgtgtttggaattaatacagcgacaggaaacattacattgcaagagaaa
ctgttgagcaaagactatggcttgtatcaactactcgtaaaagtcagtgatcttggacag
ccccaacctctccattccacagtaatggtcaatttgtttgtcaatgagactgtgagcaat
aaaagttacttggaagacttgttgcacaggcgaactgttttcacagaagaagtgcaaact
gaatcaaatccatgtccattattacagacattagacatcccctgttcccctccaatcatt
cccattgcaatcacaatgattattgtctctgttattttctttactatttctctttgtatg
cttctaagcatgagaaagaaaagtaaaaaaaaagaactttacatagatgcccagatacca
ttaaaaataaatcttgactactatacaaaagactggaatgatgaacagttgtag
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