Hemiscyllium ocellatum (epaulette shark): 132820467
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Entry
132820467 CDS
T09720
Symbol
pcdh11
Name
(RefSeq) protocadherin-11 X-linked
KO
K16498
protocadherin delta 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132820467 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hoc01009
]
132820467 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hoc04515
]
132820467 (pcdh11)
Protein phosphatases and associated proteins [BR:
hoc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132820467 (pcdh11)
Cell adhesion molecules [BR:
hoc04515
]
Cadherins
Protocadherins
132820467 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
DUF6249
Cadherin_4
TMEM154
Motif
Other DBs
NCBI-GeneID:
132820467
NCBI-ProteinID:
XP_060688619
LinkDB
All DBs
Position
11:complement(82701200..82704973)
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AA seq
1003 aa
AA seq
DB search
MLLLLVVSPPVWGQERDYSLREELPDNVLVANLVRDLNLTAAAAAGLPLTFKLVSKTGDA
PLLRVEGSSGELYTTAHRIDRERLCANTFSDSSRCFYEVEVAVLPNEVFQLVKMRFLIED
VNDNAPLFPSAVINISIPENTAVNSRYSVPSALDPDAGINGIQHYELLKGQSVFGLDIIE
TPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGQPPRSSTAILQITVTDVNDNRPVFKE
GETDVHIPEDAPVGTSVVQLHATDADLGSNAVVSFSFSNQVSALARRLFAVNPSTGLITV
RQPLDREEFPMHKLTVLASDGSSTPSRAVVTINITDVNDNVPTIDTRYIINPVNGTVLLS
ENAPLNTKIALITVTDEDADLNGKVTCFTDHDVPYRLKPVFESQFLLETAALLDYETTKE
YTIKIVASDAGKPPLNQSATVVIKLKDENDNAPVFNQPVIGLSIPENNTPGTQLTKISAT
DADSGKNAEITYLLGPNAPSIFSVDRRTGILSAMRRLDREKQDRYVFTVLARDGGKPSIQ
SNATVVLTVLDQNDNSPSFTHSEYNFYVPENLPMYGTVGLITVTDADAGGNAAVSLSILN
DKGYFIIDPNSGVIKPNITFDREQQSSYTFQVMAVDGGRPQRSSVARVTINVVDVNDNSP
VFVYPPSNFSYELVSTSASPGSVVGKVFAIDNDTGMNAELRYSIVSGNSRGLFAIDPVTG
NITLQEKVTTADHGLYRLVVKVIDLGQPESLHAMALVHLFLNETINNFTYVQDLVRKSME
TPLDKNVGDSQMTPQTNDYIKIVIAIIAGTMTVILVIFVTALVRCRHTPRHKTVQKGKQS
GEWVSPNQENRQIKKKKRKKKRSPKNLLLNFVTIEESKPDDPAHEHINGTLDLPVELEDQ
TMGKYNWGTTPTTFKPDSPDLGKHYKSASPQPSFQIKPETPVPVKKHHVIQELPLDNTFV
VGCDSLSKCSSSSSDPYSVSECSCQGGFKTAGPIHTRQVMQRF
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgctggtggtctccccgccggtttggggccaggagagggattacagcctg
cgggaggagctgcccgacaacgtgctggtggcgaacctggtgcgggacctgaacctgacc
gcggctgcggcggccggtctgcccctcaccttcaagctggtctccaagaccggggatgcc
ccgctgctgcgggtggaggggagcagcggtgagctctacaccaccgcccaccgcatcgac
cgcgagagactgtgcgccaacaccttcagcgacagcagccgctgcttctacgaggtcgag
gtggccgtgctgcccaacgaggtcttccagctggtcaagatgcgcttcctcatcgaggac
gtcaacgacaacgcgcccctcttcccctcggcggtcatcaacatctccatcccggagaac
accgccgtcaactcccgctactcggtgccctccgccctggaccccgacgctggcatcaat
ggcatccagcactacgagctgctcaagggccagagcgtcttcgggctggacatcatcgag
acccccgagggcgacaagtggccgcagctcatcgtccagcagagcctggaccgcgagcag
aaggacacctacgtgatgaagatcaaggtggaggacggtgggcagccgccccgctccagc
accgccatcctccagatcaccgtcaccgacgtcaacgacaaccggcccgtcttcaaggag
ggcgagaccgacgtccacatccccgaggacgcgccggtgggcacctcggtggtccagctg
cacgccaccgacgccgacctgggctccaacgccgtcgtcagcttctccttcagcaaccag
gtctcggcgctggcccgtcgcctgttcgccgtcaacccgtccaccggcctgatcaccgtc
aggcagccgttggaccgggaggagttccccatgcacaagttgaccgtcctggccagcgac
ggtagctcgacaccctccagggccgtggtcaccattaacatcaccgacgtcaatgacaat
gtgcccaccattgacaccaggtacatcattaaccctgtcaatggtactgtcttgctgtcg
gaaaacgcaccactcaacaccaaaattgcactgatcacggtcacggacgaagatgccgac
ttaaatgggaaggtcacctgcttcactgaccacgatgtcccataccgtttgaagcctgtg
tttgaaagccagttcttattagaaactgctgccttgctggactatgagactacgaaagaa
tataccattaagatagtggcttctgatgcaggtaaaccaccgttaaatcaatcagccact
gtggtgattaaactgaaggatgagaatgataacgctcctgtttttaatcagcccgtaatt
ggcctgtcaatccctgaaaataacacccctggtacacagctaacaaaaatcagtgccact
gacgcggacagtgggaaaaatgcagagatcacttacctcctgggtcccaatgccccgtcc
atcttcagtgtagatcggagaactggcattctgtcagctatgaggagattagatcgagag
aaacaagaccgttacgtttttacagtactggccagggatggaggcaagccttctattcag
agcaatgctactgtggttttgactgtgttagatcaaaatgataacagcccttccttcaca
cacagtgaatacaatttctacgtgcctgaaaatctgcccatgtatgggacagttggactt
attactgttacggatgcagatgcaggaggcaatgcagctgttagcctttccatcttgaat
gataaaggctactttataattgatcccaacagtggggtcatcaagcccaatattacattt
gacagggagcagcaaagttcctatacatttcaagtcatggctgtggatggaggaaggcct
caacggtcgtctgtggcgagggtgactataaatgttgttgatgtaaatgataacagtcca
gtgtttgtatatcctccgtctaacttttcgtatgaactggtatcgacctctgccagccct
ggctctgtggtgggtaaagtctttgcaattgacaatgacacagggatgaatgccgaactg
cgctacagtatagtcagtgggaattccagaggactgtttgccattgacccagtgactggc
aatatcactttgcaagagaaggtgaccacagcagaccatggcttatacaggctcgtggtg
aaggtcattgatttgggtcagccagaatccttgcatgccatggcacttgtacacttgttt
ctcaatgaaaccatcaataattttacctatgtgcaagatctggtacggaagagcatggag
acgccattggataagaatgttggagatagccagatgaccccacagactaatgattatatt
aagattgttattgccatcattgctgggactatgactgtcattcttgttatttttgtgact
gctttggtgcgttgccgtcacacgccaaggcataaaactgtgcagaaggggaaacagagc
ggggaatgggtttctcctaatcaggaaaaccgacaaattaagaagaagaaacgaaagaag
aagaggtcaccaaagaaccttcttctgaattttgttacaattgaggagtccaaaccagat
gaccctgctcacgagcacatcaatggcaccttggaccttccggtggaattggaggatcag
actatgggcaagtacaactggggcacaacacccaccacttttaaacctgatagcccggac
ctaggaaaacactacaagtcagcctctccacagccctcctttcaaatcaagccagagact
ccagtgccagtgaagaagcatcatgtcatccaagagttaccgctggataacacatttgtt
gtgggctgcgactccctatccaagtgttcttcgagcagttctgacccctacagcgtatca
gaatgcagttgtcagggaggcttcaagactgcagggccaatccacaccagacaggtaatg
cagagattctaa
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