Hemiscyllium ocellatum (epaulette shark): 132820580
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Entry
132820580 CDS
T09720
Symbol
nyx
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hoc00535
]
132820580 (nyx)
Proteoglycans [BR:
hoc00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
132820580 (nyx)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
LRR_At5g56370
Salyut
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
132820580
NCBI-ProteinID:
XP_060688767
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Position
12:53706581..53712894
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AA seq
481 aa
AA seq
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MCIIVCFLSIYFSVVLFATLRASAAWTCSRLCPTVCTCSAERNCVVLCDRAGLQQVLSDF
PWEASLISLEKNNIKFLSEKAFGTLPALRSLSLNHNNLSFITPGAFKGLPHLSELQLAHN
EFIKYLHTRTFTNLKRLKKLDLSNCNLFNIPDRIFIAVPSLQELAMWQNNFRRIPAAVRA
TETLRLLYLERNRIEAVAYNSLQGLRRLKYLNLQNNKIAVIHEKGFKDCVELEYLYLNDN
VLRNLPEFAFQELRHLKMLNLGGNALVNVSSTWFSQLVELEVLYLDRNAISYIEEGTFEN
LTSLISLHLNSNNLTSLPFSVFQPVYFLGRLYVFRNPWECDCKMEWLKEWMENYKLVRDI
PCASPPSVAGMDLSQVLFPKSTEGICVDPVEQNETVYTPIPTEHARSIADNRFSNLISKL
LFPEKYEDSENTTEIFRNMSVPGGVNRETSTAVTVNSNLDLHIQAMLDFDLLFHKNIRLR
D
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatcatcgtctgtttcctgtcgatttatttttcagtggttttgttcgcgactctg
cgtgcctctgctgcctggacctgctctcgcctctgtcccacagtgtgcacttgttctgct
gagagaaactgtgtcgttctctgtgaccgagccggattgcagcaagtcctcagcgacttc
ccatgggaggcctcccttatcagtttggagaaaaataacatcaaatttttgtcagagaag
gccttcggtactcttccagccctccgctctttatccttaaaccacaacaatctctctttc
attaccccaggcgcatttaaagggctgccccatctcagcgaactccaactcgcccacaac
gagtttattaagtatctgcacaccagaacgttcactaatctcaaacgacttaagaagctc
gatttgtctaattgcaatctatttaatatcccagaccggatctttatagcagttccctct
ctgcaggagttggctatgtggcagaataacttcaggagaatccctgcagcagtgagggcc
acagagactctcaggcttttgtatctggagaggaacagaattgaagcagtggcttataac
tctctgcaaggattacgccgtttgaaatatttaaatttacaaaacaacaaaattgcggta
atccacgaaaaaggttttaaagactgcgtggaattggaatatctctatcttaatgataac
gtcctgaggaaccttcccgagtttgcttttcaagaactcaggcacctgaagatgttaaac
ctgggaggtaatgctttggtgaacgtctccagtacttggttcagtcagctagttgagtta
gaggttctctatctcgacagaaacgccatcagttacatcgaggaagggacttttgaaaac
ctgaccagtttgatctccttacatttgaatagcaataacctgacctcactgccgttttcc
gttttccaacctgtatatttcctcggcaggctctatgtcttcaggaacccatgggagtgt
gactgcaagatggaatggttgaaagagtggatggaaaactacaaacttgtccgggacatc
ccgtgtgcctctccaccgtcagtagcgggtatggatctgagtcaagtgctcttccccaaa
tctacggaagggatttgtgtcgatccagtggaacagaatgagacagtttatactccaatt
ccgacagagcatgcccgctccatcgccgacaatagattcagtaaccttatctcgaaatta
cttttccctgaaaagtacgaggattcggagaacaccaccgaaatcttcaggaatatgtca
gtcccgggcggagttaaccgggaaacgtctacagcggttactgtcaacagtaatctggat
ctccacatccaggcaatgctggactttgatctcttgtttcataaaaacatacgtttaagg
gac
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