Hemiscyllium ocellatum (epaulette shark): 132821604
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Entry
132821604 CDS
T09720
Symbol
lifra
Name
(RefSeq) LIF receptor subunit alpha a
KO
K05058
leukemia inhibitory factor receptor
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
132821604 (lifra)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
hoc04050
]
132821604 (lifra)
04090 CD molecules [BR:
hoc04090
]
132821604 (lifra)
Cytokine receptors [BR:
hoc04050
]
Interleukin receptor families
IL6/12 receptor family
132821604 (lifra)
CD molecules [BR:
hoc04090
]
Proteins
132821604 (lifra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIFR_D4
LIFR_D2
fn3
LIF-R_Ig-like
LIFR_N
IL6Ra-bind
EpoR_lig-bind
Pur_ac_phosph_N
Lep_receptor_Ig
fn3_2
Hisat_C
Motif
Other DBs
NCBI-GeneID:
132821604
NCBI-ProteinID:
XP_060690265
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Position
2:complement(5998317..6182296)
Genome browser
AA seq
1192 aa
AA seq
DB search
MNLRVLFGFVLLALQSSGFHMAIAQNAGQCGSISTKNLVASVNSSYNITCYFCEFGAADQ
VEWKYAGNLLPSSYYTKITSNISMVSLNNLGLTSQQGENLTCTFKTESYTTSVKTGYPPE
APRDLECVTQNFGKLKCSWRTGRDTNIETNYTVCSWLGDTCTEVGAKTFIERDFVAFQDL
QLQITATNELGKQTSEKFRKLENDIVFQPYTPELLRVFKGLTDFQLTVEWNEGGTKYGLG
LKLMFEIQIIHTHTMREVWKGNYSSALDFSRDRILQFNWTSDMPLQCTAHSVRIRAISGE
SEILFSGVKAWSDWSLVLTLEGLDTFNQTKGQVYPVDGTVLKAGSSMTFCCVAGQGKKID
EFLFSDLNASVIELSGRSQAIKVQNVTPSIESGTNVLCIINKKEYEGAVIFIGYPPDLPR
NLSCETRDLKTLNCTWEPGRSTSLVSKRRTIYTLIDRSSEITLPCEEASKIYPRYWCGFP
ISNGSGVYNLSVHGKNPLGEAQSHITVDVTSVFHPYAPHQLSEEAKILRSINVSWSDPVD
YTGISLLCEMDIRDHLGSKMSYNYSVPGGPVDARHIVTLDNLRPNTQYSIQARYSAQHFW
KWSKWSNLLNFLTEQAAPSTSLNVWRKIMPNRTVMIYWKPLSDAEANGQVLSYSITWMKI
GSNSSTTIERSTSGVAIDLDQAAYIITVLAQNSAGTSPPSVVKIPAHTNDEHLGDFKAIG
VGDGFHVTWLRHQVESCGYTVEWCEVLSNSACNISWHKFPSNVTGAIIKSDYFQVGVRYM
LEVHECRDDGDYLLKRLVGYTRELAPAEAPNLDIEETTSDSVLIKWLDIPVDKQQGFIQG
FKVYYSKLYNNSAFKPVGGQKLNTDNLLPKIINDSNARIFKIGGLEPGTTYTVALSAYTR
GGDSPSRDVTVTTPNSPLAVILGITLPLVGVITLGVILSIFCYRKQEWIKETFYPDIPDP
NNSKVLQDGTFLQGVNSCKTLEPKDCTPNEVQVVEEKQIGFDVEKEVEVADETEVVPEDI
SDTENQNQGVLSYSPRSAPVENSGKINPAFEAMASPSIYPSDVTYTSIRGPGYQQQEARD
DEVEVIVKSGYQPQIHGAIDLAPVREQTEIQELMPRVNGYQPQAHRQSWSQDSGEFPPPE
TDSIGSPTSINSQAFLIPERMLGEDHSLRPGVKTWSLPFFQNSRMTFDSNDS
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgaatctacgggtgttgtttggatttgtgcttttagcccttcagtcatctggttttcac
atggctattgcacagaatgcaggtcaatgtggttccatttctacaaaaaacttggttgcc
agtgtcaattccagctacaatataacctgctacttttgtgaatttggtgctgctgatcag
gttgaatggaaatatgctggcaatctccttcccagcagctactacaccaagatcacctcc
aacattagcatggtgtcactgaataaccttggcctaaccagccagcaaggagaaaatctg
acgtgtacatttaaaacagagtcttacaccacttcagtcaagactggatatcccccggag
gctcctcgggatttggaatgtgtaacccagaactttggtaaactcaagtgttcttggcgc
acaggaagagatacaaatatagaaacaaactacactgtctgctcttggttaggagatacc
tgcactgaagtgggagctaaaacctttatcgagcgtgactttgttgcatttcaagattta
caattgcagataactgctacaaatgaattaggcaaacagacgtcagaaaaatttcggaag
ttagaaaatgacattgtatttcaaccttacacaccagaactcctcagggtgtttaaaggt
ctaactgacttccagttaactgtggaatggaatgaaggtggtacaaaatatggtctgggt
ttaaaactgatgttcgaaatccaaatcatccacacacacacaatgcgagaggtctggaag
gggaattacagtagtgctctggacttttcccgggacaggatcttgcagttcaattggaca
tcagatatgcctctccagtgcacagcacactctgtgaggatccgtgctattagtggcgag
agtgaaatcctattttctggtgtcaaagcttggagtgactggagtctagtcttaacactt
gaagggctagatacatttaaccaaaccaagggtcaagtctatcccgtggatggtactgtt
cttaaagcaggatccagcatgacattttgttgtgtagctggtcaaggaaaaaaaattgat
gaatttttgtttagtgacttgaatgcatcagttattgaattaagtggcaggagccaggct
atcaaggtccagaatgtcaccccctcgatagaatctggaacaaacgttctttgcattata
aacaagaaggagtacgaaggagcagtcatatttattggctatccccctgatttgccaaga
aatctcagctgtgaaacacgtgacttaaaaacactaaactgtacttgggaaccagggagg
tcaacttcattagtctctaagcgtcggactatatatactctcatcgacaggtcatcagag
atcaccttaccatgtgaagaagcttcaaagatctacccgcgttactggtgcggttttccc
atttcaaatggcagtggtgtttataatctttcagtacatggtaaaaatccattgggggaa
gctcagtcccatataacagtggacgtgaccagtgtgtttcacccttatgcccctcaccaa
ctgagtgaagaagccaaaatattaagaagtatcaatgtgtcctggtcagatccagtagat
tatacagggatctcactgctctgtgagatggacataagagatcatttggggagcaagatg
tcatataattactctgtgcctggaggaccagtggatgcaagacacatcgtaacattggac
aatttaagacctaatacgcaatattccattcaggctcgctattctgctcagcacttttgg
aagtggagtaaatggagcaatttgctaaattttctaactgaacaagctgctccatcaact
agcctgaatgtctggagaaagattatgccaaacaggacggtgatgatttactggaagcca
ctttcagatgctgaggcaaatggtcaagttttatcctatagtataacttggatgaagata
ggaagcaattcgtcaaccacaattgagaggtcaacttcaggtgtagcaatagatctcgat
caagctgcctatataattacagtattggcacaaaatagtgctgggacatcaccgccttct
gtggttaagatacctgcacacactaatgatgaacatttgggtgacttcaaagccattggt
gttggggacggatttcatgtgacttggctgaggcaccaagttgagagctgtggctacact
gtcgagtggtgtgaagtcttaagtaactctgcgtgtaacataagttggcacaaatttcct
tcaaacgtaacaggtgccataataaaatcagattactttcaagttggagtacggtacatg
cttgaggttcacgagtgtagggatgatggagattacttactgaaaaggctggttgggtat
acacgtgaactggccccagccgaagctccaaatctggatattgaggaaaccacgagtgat
tcagtcctgattaaatggcttgacatccccgtggacaaacagcaaggattcattcagggc
ttcaaggtttattacagtaaactatacaacaattcggctttcaagcctgtgggtggtcag
aagctgaacacagataatctactgccaaagatcataaatgattctaatgcacggatattc
aagatcgggggccttgaacctgggacaacatacactgtggcactgagtgcctacaccaga
ggaggggatagtcccagcagagacgtcacagtgactacaccaaacagcccccttgctgtg
attcttgggattactttgccccttgtgggagttataacactgggagtcatcctcagtatc
ttctgttaccgaaaacaagaatggatcaaagagacattttatcctgatattcccgatcca
aacaacagcaaagttcttcaggatggaaccttccttcagggagtcaactcatgcaaaact
ctggaaccaaaagattgtacacccaatgaggtgcaggttgtcgaagagaagcagattggt
tttgacgttgagaaggaggttgaagtggctgatgagactgaggtagttcctgaggatatt
tctgataccgagaaccagaatcaaggtgtcttatcgtacagtccgcgtagtgcacctgtt
gagaattcagggaagattaacccagcgtttgaggcaatggcctctccatccatctatccc
agtgatgtaacgtatacaagcatacgaggtcctggctaccagcaacaagaggccagggac
gacgaggtggaggtgattgtcaagtcaggctatcaacctcagatccatggagccattgat
cttgcaccagtcagggagcagacggagatacaggaactaatgcctcgtgttaatggctat
cagccacaggcccaccgccaatcctggagccaagattctggagagtttccaccgcctgag
actgattccattggcagcccaacttccatcaactcccaagcattcctgattccagagagg
atgctgggagaggatcacagtttaagacctggtgtgaaaacatggtccctgccctttttc
cagaattccagaatgacttttgattccaacgacagctga
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