KEGG   Hemiscyllium ocellatum (epaulette shark): 132821632
Entry
132821632         CDS       T09720                                 
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03020  RNA polymerase
hoc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132821632 (polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    132821632 (polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hoc03021]
    132821632 (polr2d)
   03400 DNA repair and recombination proteins [BR:hoc03400]
    132821632 (polr2d)
Transcription machinery [BR:hoc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     132821632 (polr2d)
DNA repair and recombination proteins [BR:hoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132821632 (polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 BIG2_C Tfb4 Maelstrom
Other DBs
NCBI-GeneID: 132821632
NCBI-ProteinID: XP_060690319
LinkDB
Position
13:79930215..79934982
AA seq 142 aa
MAACGSEARVGDVEEDASQLVFPKEFESSETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELASLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggcctgtgggagcgaggccagggtcggggatgtggaggaggacgcctctcagctg
gtgttcccgaaagaatttgaaagctcagagaccctgttaaactctgaggtccacatgcta
ctggagcaccgaaagcagcagaatgaaagtgcagaggatgagcaggagctctctgaagtc
ttcatgaaaacattaaactacacagccaggttcagccgcttcaaaaacagggaaaccatc
gccagtgtcaggagtctgctattacagaagaaactgcacaagtttgagctggctagtctg
gccaatctgtgccctgagacagctgaagaggccaaagccctcattcccagcttggaaggt
cggtttgaggatgaggagctccagcaaatccttgatgacattcagaccaagagaagcttc
cagtattag

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