Hemiscyllium ocellatum (epaulette shark): 132821761
Help
Entry
132821761 CDS
T09720
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hoc04040
]
132821761 (trpc1)
Ion channels [BR:
hoc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
132821761 (trpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
Eno-Rase_FAD_bd
RIN1
DUF6779
Motif
Other DBs
NCBI-GeneID:
132821761
NCBI-ProteinID:
XP_060690495
LinkDB
All DBs
Position
13:6576715..6669787
Genome browser
AA seq
797 aa
AA seq
DB search
MASLYQSTESSSPNKYLTLKDVRQVKEETTIDEKLFLLACEKGDNYMVKKLLDEKFSELN
INCVDVLGRNAVTIAIENENLDILQLLLDHGCQTTDALLVAINSEVVGAVDILLNHRPRR
SSKPTIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDLSLPRPHAVGCECT
LCNAKNKKDSLRHSRFRLDIYRCLSSPSLIMLTEEDPILRAFELSADLKELSLVEVEFRN
DYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEPIDKRGLLEERMNLSRLKLAIKY
NQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLSVATLWPALSLFYLLAPKSRV
GRIIHTPFMKFIIHSASYFTFLLLLNLYSLVYNEDKKNTMGPALEMIDFLLITWITGMVW
SDVKRLWYDGLEDFMEESRNQLSFVMNSLYLATFALKIVAHNKFHAIGDRKDWDAFHPTL
VAEGLFAFGNILSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLISFTIGLT
QLYDKEFSMVEGKDCSGIFCEQQSNVAFHSAQGKTSSANSGRPATANLLMFVGTCYALFW
YIFSLAHVALFVTRFSYTDDLQSFVGALIIGTYNVVVVIVLTKLLVAMLHKSFQMIANHE
DKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYLFTSLNKWICSHTSAGKVKRQNS
LKEWKTLKHKRDQNYQKVMCCLVHRYLTAMRQKMHSTDQATEENLNELRQDLSKFRNEMR
DLLGFRTAKYAMFYSRN
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggccagtctctaccaaagcaccgagtcctcttctccgaacaaatacctgacattgaag
gatgtgcggcaagtcaaggaggagaccaccatcgatgagaagctcttccttctggcgtgt
gagaaaggagataattacatggtcaaaaagctgctcgatgagaaattcagcgagctgaat
ataaattgtgtcgatgttctggggagaaatgcagttaccattgccattgaaaatgagaat
ctggatatcctgcagcttctcttggaccatggctgccagaccacggatgctctgcttgtg
gcaattaactctgaggttgttggtgcagttgatattcttctcaatcatcgtccccgacgt
tcatcaaagccaactatagcaaaattaatgcagagaattcagaatcctgaatactcgact
acaatggatgtggctcctgttatccttgctgctcatcgtaataactatgagatcctgacc
atgttactcaaacaggacctatcactaccaagaccacatgcagtaggatgtgaatgcaca
ctgtgtaatgcaaagaacaagaaggatagtctacgccattctaggttccgtcttgatatc
taccgctgcctgtctagtccatcgttgatcatgcttacagaggaggatcctatactaaga
gcttttgaactcagcgcagatttgaaggaactgagtctcgtggaggtggaatttaggaat
gattatgaggaactagcacagcagtgtaagacctttgcaaaggatctcctagcacaggca
cggaattcccgtgaattggaggttatcttaaatcatacatccagcgatgaacctattgac
aagagaggattgcttgaggagaggatgaacctaagccgacttaagctagcaattaagtac
aaccaaaaagagtttgtggctcagtccaattgccagcagtttctgaataccgtctggttt
gggcagatggcaggctacaggcggaagcatacctgtaagaagattctgactgttctttca
gttgccaccctgtggccagcgttgtcccttttttacctgctagcaccaaagtctcgagta
gggcgaattattcacactccttttatgaaattcatcattcacagtgcatcatactttaca
tttctactgttactgaacttatactcactggtgtacaacgaagacaaaaaaaacacgatg
ggtccagcactagagatgatcgacttcctcctgattacatggataactggaatggtgtgg
tcagacgtgaagagactgtggtatgatggacttgaagattttatggaggaatctcgaaat
caactcagttttgtcatgaactcgttgtatttagcaacatttgctctcaaaattgtggca
cataataagttccatgcgattggagacaggaaggattgggatgcgttccatcctacttta
gtggcagaaggtctttttgcttttggcaacattctcagttacctacggcttttctttatg
tacacgactagttccatccttggaccattgcagatttccatgggacaaatgttgcaagat
tttggaaagttcttgggaatgtttctgcttgttctgatctctttcaccatcggccttact
cagttgtacgataaggagttttcaatggtggaaggcaaggattgttctggaatcttctgt
gagcaacagagcaacgtagccttccattctgcccagggaaagacttcaagtgccaattca
ggtagacctgccacagctaatctgctaatgtttgttgggacctgctatgccctattttgg
tatattttctccctggcacacgtggcactgtttgtcacaagattcagttacactgatgac
ctgcaatcttttgttggagcactcatcatcggcacatacaacgtggtggttgtgattgtc
ctgactaaactgctggtggcaatgctacacaaaagcttccagatgatcgctaatcacgaa
gacaaggaatggaagtttgctcgagcaaagctgtggctgagctactttgatgacaaatgt
actttaccgccaccattcaatatcattccttccccgaaaaccatttgctatctcttcaca
agtcttaacaaatggatttgctctcacaccagcgctggaaaagtgaaacgtcagaacagc
cttaaagaatggaagactctcaagcataaacgagatcaaaattaccaaaaagtaatgtgt
tgcttggtccatcgttaccttactgcaatgaggcaaaagatgcatagcacagaccaagct
actgaagagaatctgaatgaactgcgccaggacctttccaagtttcgcaatgaaatgaga
gaccttcttggcttcaggacagcaaaatatgccatgttctattcacggaactaa
DBGET
integrated database retrieval system
