Hemiscyllium ocellatum (epaulette shark): 132821777
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Entry
132821777 CDS
T09720
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132821777 (rnf13)
Enzymes [BR:
hoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132821777 (rnf13)
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132821777 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf_RING_Vps8
DUF7027
DNA_ligase_ZBD
Neur_chan_memb
Prok-RING_4
FeoB_associated
zf-RING_16
zf_RING_Vps8_fungal
zf-RING_4
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
132821777
NCBI-ProteinID:
XP_060690524
LinkDB
All DBs
Position
13:12762041..13019912
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AA seq
392 aa
AA seq
DB search
MILPLGLLILSASQIHISFMVYFVAFLHLWPVEGDIIAHSADNQTQNFDDLPSRFGYRLP
KDGLKGFLVYSRPKNACEPIISPPMTDNSSINFIVLIRRFDCNFDIKVLNAQRAGYKAAI
VHNVDSDELISMGSNDVEIFKQITIPSVFIGEASAKYLLEEFSYLRGGHIVILPDFSLPL
EYYLIPFLIIVGICLILIAVFMISKFIQDRHRARRNRLRKDQLKKLPVHKFKKGDEYEVC
AICLDEYEEGDKLRILPCSHAYHCKCVDPWLTRTKKTCPVCKQKVVASQGESDSETDDVD
SSHEENDDASENTPLLRSSLASTSAHSFGTMSESRSRQEAVESSEYEEEEEEDGESSDAG
DGVNEETVVQMQRENPEAVVGERGTRESAAIV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgattttgccattggggttgttgattttatctgcatcacagattcacataagctttatg
gtgtattttgttgcttttcttcacctgtggcctgtggaaggtgacattattgcacactcc
gctgataaccaaacacagaactttgatgatctcccatcaagatttggttaccggcttcct
aaagatggtttaaagggtttccttgtatattcaagaccaaagaatgcctgtgagccaata
atttctccacctatgacggacaattcttcaatcaacttcattgttctgattagaagattt
gactgcaattttgatattaaggtattgaatgctcagcgggctggatacaaagctgccata
gtacataatgttgactctgatgaacttattagtatggggtccaatgatgttgagattttc
aaacaaatcaccattccatctgtgtttattggggaagcgtcagctaaatatcttctggaa
gaatttagctatttaagaggtggccacatagtgatactacccgattttagccttccattg
gagtattatctaattccattcctcatcatagtgggaatctgtttaatcctgattgctgtt
tttatgatttcaaagtttattcaagacagacacagggcaaggaggaaccggttgcgtaaa
gatcagctgaaaaaacttccagtacacaaattcaaaaagggtgatgaatatgaggtgtgt
gcaatttgtctggatgaatatgaagaaggtgacaagctgcgcatcctgccctgttcacat
gcataccactgtaaatgtgtagacccatggctaacaagaacaaaaaagacttgccctgtc
tgcaaacagaaggtggtggcatctcagggagaatcagattctgaaactgatgatgtagac
agcagccacgaagaaaatgatgatgcctctgaaaacacacctctgctgagatcttcactt
gcctccaccagtgcgcattcctttggtaccatgtcagaatctcgatcccgccaagaagca
gtggagtcatcagaatatgaagaggaagaggaggaagacggagaaagcagcgatgctggg
gacggagtcaatgaagaaacagtagttcagatgcaacgggaaaaccctgaagctgttgtc
ggagagaggggaaccagagagtctgccgcaatagtttga
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