Hemiscyllium ocellatum (epaulette shark): 132821792
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Entry
132821792 CDS
T09720
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132821792 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132821792 (dhx36)
03012 Translation factors [BR:
hoc03012
]
132821792 (dhx36)
Enzymes [BR:
hoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132821792 (dhx36)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
132821792 (dhx36)
Translation factors [BR:
hoc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
132821792 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
NPHP3_N
AAA_14
ABC_tran
NB-ARC
AAA_23
T2SSE
PhoH
Ntox8
Motif
Other DBs
NCBI-GeneID:
132821792
NCBI-ProteinID:
XP_060690566
LinkDB
All DBs
Position
13:complement(17953974..18040102)
Genome browser
AA seq
969 aa
AA seq
DB search
MSSRYWRSGGGGGGGGGGSGGSSSAGWEPSGGGRGRGRHPGHLKGKDIGLWYAKRQGQKS
KEQERSERAVVQMDEAREEHITRLLNSVQTRGDYKDQRASVSADSSKNWRSACPSTSTIK
EIKPETSADLEYLFETITQDVFLDEELREDLMKKKSSLRYLDMKRFREKLPSYGMKKEVV
DLINENQVLVISGETGCGKTTQVTQFILDDYIEKGKGSLCRVVCTQPRRISAISIAERVA
AERAEACGEGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSLLSTVSHLVLDEVH
ERSLQSDVLMTIVKDILPFRPDLKVILMSATLNADKFSEYFGNCPMLHIPGFTYPVKEYI
LEDVIELLQYRPQTQEIRRPSSKRRFMQGCMFRPEKERVEEEYQQQWPEYLRELQGRYSD
STIEALEVLHDDDKIDLNLIVALIKHIVLLGEEGAILVFLPGWDNISSLNDLLTAQTMFK
SDRFVIIPLHSLMPSVNQTEVFKKPPPGVRKIVIATNIAETSITIDDVVHVIDGGKIKET
HFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGSCYHLYNGLRESLLDDYQLPEIMRTP
LEELCLQIKILNLGRIAQFLEKAMQPPSKEAVNLAVTHLKELNALDRNEELTPLGVHLAR
LPVEPHIGKMILFGALLCCLDPVLTIAASLSFKDPFVIPLGKEKLADAKRRELSKQSRSD
HLTVVNAFKGWEEAKRRGFRSEKDYCWEFFLSPNNLQMLHNMKGQFTEHLLVAGFVSSKN
PRDPQANINSENEKLVKAVVCAGLYPKVAKIRPSFSKKRKMVKVFTKSDGRVNIHPKSVN
AEEGEFEHNWLIYHLKMRTTSIYLYDCTEVSPYSLLFFGGDISIQKEQGQETISVDEWIV
FQSPSRIAHLVKDLKRELDALLQDKIKKPRPVDWNNRSKDCAVLSAIIDLITTQDTASAK
NYTPRFQSY
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgcgttactggaggagtggcggcggcggcggaggaggaggaggagggtcggga
ggatcgtcttcggcgggatgggaaccctcgggcggtggcagaggccggggccggcatcct
gggcacctgaaaggcaaagacatcggcctgtggtacgccaagcggcagggccagaagagc
aaggagcaggagcggagcgagagggcagttgtgcagatggatgaagcaagagaggagcac
atcacccgactgctgaattctgtccagacacggggtgattacaaagaccagcgtgcctca
gtgtcagccgactctagcaagaactggaggagtgcatgtccctctacatccaccatcaag
gaaattaaaccagagaccagtgctgatctagagtacctctttgaaaccattactcaggat
gtgtttttggatgaagaactgagggaagaccttatgaagaagaaatcgagcttgagatac
ctggatatgaagagatttcgggagaaactcccttcttacggtatgaagaaagaagttgta
gacttgatcaatgaaaatcaggtgcttgtcataagtggagaaacaggttgtgggaaaacc
acacaggtgacccagttcattctggatgactacattgagaaaggcaagggttctttgtgc
agggttgtgtgtacccagcctcgacggatcagcgcaatctcgatagctgagagggtcgca
gcagaaagagctgaagcctgcggtgaagggaacagtactggctaccagatcaggttgcag
agccgcctgccacggaaacaaggttccatcttgtactgcacgactggaatcattctccag
tggctacagtcagactctcttctatctactgtcagtcaccttgttttggacgaggtccac
gagaggagtttgcagtcagatgtcctgatgacaattgtgaaggacatcctgccgttcagg
ccagatctgaaggtgatattgatgagtgcaactctaaatgctgacaagttttcagaatat
tttggcaactgtcccatgctgcatattccgggattcacctatccagtgaaggaatacatc
ttggaagatgtaattgagttgctccagtatcgtccacaaacccaagaaattcggagaccg
tcctccaagaggagattcatgcaaggttgcatgtttcgaccagagaaggaacgagtggag
gaagaataccagcaacaatggccagaatatttaagagagttgcaaggaagatattctgac
agtacgattgaagccttggaagttctgcatgatgatgataaaatagacctcaatctgatt
gtagccctcataaaacacattgttcttcttggagaggagggtgccattttagtcttcctt
cctggatgggacaatatcagcagcttaaatgacctcctgactgcacaaaccatgttcaaa
tcagatcggttcgtgatcattcctctccactctctcatgccttcggtgaatcagacagag
gttttcaagaagccacctccgggagttcgcaagattgtaattgctaccaacattgcagag
acaagcatcactatagatgatgtggtccatgtgatagatggaggaaagataaaagaaact
cacttcgacactcaaaacaatatcagcacaatggcagcggaatgggtcagcaaagctaat
gccaagcagcggaaaggtcgagctggcagggtgcagccaggttcctgttaccacttgtac
aatggtttgcgggagagccttctagatgattatcagcttccagaaatcatgaggactcca
cttgaagagctttgcttgcagatcaagattttaaatcttggtcgaattgcacaattcttg
gaaaaggcaatgcagcctccatcgaaggaagctgttaatctggctgtgacccaccttaaa
gagctgaatgctttggataggaatgaagagttaactccacttggggtccatttagctcgc
ctgccagtggaaccccacatcgggaagatgattctgtttggagcattattgtgctgtctg
gatccggttctcaccattgcagccagtctcagcttcaaggatccatttgtgatcccgctg
ggtaaagagaaactggctgatgcaaaacgccgggaattatcgaagcagtctcggagtgac
catctgactgtggtaaatgcgtttaagggctgggaagaagcgaaaaggagaggtttcaga
tcagagaaggactactgctgggagttcttcctttctccaaacaacctgcagatgcttcat
aacatgaaaggtcaatttactgaacacctgctggtggctggctttgtcagcagcaagaat
ccccgagatccccaggcaaatataaattcagaaaacgagaagctagttaaagctgtggta
tgtgcgggcttgtatccgaaagtggcaaaaatacgaccgagtttcagcaagaagagaaaa
atggtgaaagtctttaccaagtcagacggaagagtcaacattcacccaaaatctgttaat
gctgaagaaggtgaatttgagcataactggctgatctaccatttgaagatgcggacaacc
agtatctacctgtatgattgcacggaggtctcaccttactccttgctgttctttggagga
gatatttcgatacagaaggagcagggccaggagaccatctctgtggatgaatggattgtg
ttccagtcaccatccagaattgcccatttagtaaaggatctgaaaagggagctagatgct
cttctacaagacaagattaagaagccccgacctgtggattggaataatcgatcgaaagac
tgtgctgtcttgtcagcaatcatagacttgataaccacacaagacaccgccagtgcgaag
aactacacgccccgattccagagctactga
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