Hemiscyllium ocellatum (epaulette shark): 132821841
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Entry
132821841 CDS
T09720
Symbol
cpdp
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132821841 (cpdp)
Enzymes [BR:
hoc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
132821841 (cpdp)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
132821841 (cpdp)
Prokaryotic type
132821841 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
132821841
NCBI-ProteinID:
XP_060690691
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All DBs
Position
13:32270618..32304209
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AA seq
581 aa
AA seq
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MSKNGKQTNRNAKDSEHKKKIEEKSNKKETAFPSSSNSLKTSSKKSTKKPNHNNSSQEDS
PKLQAKGKRTMEERPPGLIEGKLSNSRINKKRKTEHQAETSPSGEGNLLKSINKARLTTA
KSVEEFNFNKKRIRLLSKTESVRENSWGIIYWMSRDQRVQDNWAFLYAQRLALKHKLPLH
VCFCLVPKFLDATIRHFGFMLKGLQEIAEECKQLNISFHLLIGFAKDVLPEFVKGHNIGG
IVTDFSPLRLPLEWIEDVRHNLPENLPFIQVDAHNIVPCWVTSDKQEYSARTIRRKIHDK
LPQFLTDFPPVIQHPFSSSLKVQLIDWDAAAANLEVDRTVKEVDWAKPGTAAGLIRLESF
IKEQLQHFSTDRNNPNKTALSNMSPWFHFGQVSVQRTILEIKKYRTKFKDSVDSYIEEAV
VRRELADNFCFYNKQYDKIEGAFDWAQKTLKMHSKDQRPYLYTLKELEDGRTHDSLWNAA
QLQMIHEGKMHGFLRMYWAKKILEWTTSPEEALKFSIYLNDRYELDGRDPNGYVGCMWSI
CGIHDQGWKERPVFGKIRYMNYNGCKRKFDIGQFERKYSYN
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagaatgggaaacaaaccaacaggaatgctaaagattctgagcacaagaaaaaa
attgaagagaaatcaaataaaaaggaaactgcatttcctagctcctccaacagtctgaaa
acatcctcgaaaaaatcaacgaagaaacctaatcataataactccagtcaggaagattcc
ccaaagctccaagctaagggaaagagaacaatggaagagagacctccaggattgattgag
gggaaattgtccaattcgaggatcaataaaaaaaggaaaactgaacaccaggctgagaca
tctccctctggagaaggaaatctgttgaaaagtatcaataaggcacgtttgaccacagca
aaatcagtggaagagtttaattttaacaaaaaacgcatccgtctcctttctaaaacagag
agcgtcagggaaaactcttggggaattatttactggatgtcccgtgaccagcgagtccag
gataactgggctttcttatatgcacaacggctagctcttaagcataaacttccgctccat
gtctgcttctgtctggtgcccaaattcctagatgccaccatccgccattttggtttcatg
ctaaagggactccaagagattgctgaggaatgcaagcagctgaatatttctttccatcta
ctcattggtttcgccaaagatgtgctgccagagtttgtgaaagggcacaacattggaggg
atagttacagatttctctccattgcgtctcccactggagtggatcgaggatgtaagacac
aacctaccagaaaatttaccatttattcaggttgatgctcacaatattgtaccctgctgg
gtaacttcagacaaacaagaatacagtgccagaacaatcaggaggaaaattcatgataaa
ctccctcagttcctgacagactttcctccagttatccaacatccttttagctcatccttg
aaagtacagttgattgattgggatgcagctgcagcaaaccttgaagtggatcgcacagtg
aaggaagttgattgggctaaaccagggactgcagcagggctaattaggttggagtcattc
attaaggagcagcttcagcatttcagcactgacagaaacaatccaaataaaactgccttg
agtaatatgtcaccgtggtttcactttggtcaggtttcagttcagcgaaccattctggag
ataaagaaataccgtaccaagtttaaggacagtgtggacagttacattgaagaagctgta
gtgcgacgggagctggcagacaacttttgtttttacaataaacaatatgacaagattgaa
ggtgcttttgactgggcccagaaaactttgaaaatgcacagcaaagaccaacggccgtat
ctttatacactgaaagaactggaagatgggcgaacacatgattccttgtggaatgcagca
cagcttcagatgatccatgaggggaagatgcatggttttcttcgaatgtactgggctaaa
aagattctggaatggactacttctcctgaggaagccttgaagttctccatctacctgaac
gatcgctatgaactggatggcagagatccaaatggatatgtaggttgcatgtggtcaatc
tgtggaatccatgaccaaggctggaaagagcgacctgtttttggcaagattcgctacatg
aattacaatggctgtaagaggaaatttgacattggtcagtttgaaagaaaatacagttac
aattag
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