KEGG   Hemiscyllium ocellatum (epaulette shark): 132821875
Entry
132821875         CDS       T09720                                 
Symbol
polr2h
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03020  RNA polymerase
hoc03420  Nucleotide excision repair
hoc04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132821875 (polr2h)
  09124 Replication and repair
   03420 Nucleotide excision repair
    132821875 (polr2h)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hoc03021]
    132821875 (polr2h)
   03400 DNA repair and recombination proteins [BR:hoc03400]
    132821875 (polr2h)
Transcription machinery [BR:hoc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     132821875 (polr2h)
  RNA polymerase III system
   RNA polymerase III
     132821875 (polr2h)
  RNA polymerase I system
   RNA polymerase I
     132821875 (polr2h)
DNA repair and recombination proteins [BR:hoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132821875 (polr2h)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 132821875
NCBI-ProteinID: XP_060690773
LinkDB
Position
13:40941930..40956504
AA seq 150 aa
MAGILFEDIFDVKDIDPEGIKFDRVSRLHCESESFKMDLILDVNIQIYPVELGDKFRLVI
ASTLYEDGTPDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDESSTEAATRLSAYVSYGG
LLMRLQGDANNLHGFEVDSRVYLLMKKLAF
NT seq 453 nt   +upstreamnt  +downstreamnt
atggcaggaattttatttgaggatatctttgatgtgaaggatattgacccggaaggtata
aagtttgacagagtttctcgcttacactgtgaaagtgaatcctttaaaatggatctaata
cttgatgtaaacattcagatttaccctgttgaactaggtgacaagtttcgtcttgtgata
gcaagtactctttatgaagatggaacgccagatgatggagagtataatcccacagatgac
cggccatcgagggctgaccaatttgagtatgtcatgtatggaaaggtttatagaatagaa
ggcgatgagagttcaactgaagcagccaccagactatcagcctatgtatcatatggaggt
ctactgatgaggcttcaaggtgatgcgaataacttacacggctttgaagtagattccaga
gtctacctgttaatgaagaagcttgctttttaa

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