Hemiscyllium ocellatum (epaulette shark): 132821906
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Entry
132821906 CDS
T09720
Symbol
cul3b
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-3b
KO
K03869
cullin 3
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04120
Ubiquitin mediated proteolysis
hoc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132821906 (cul3b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
132821906 (cul3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132821906 (cul3b)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132821906 (cul3b)
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Cullin
132821906 (cul3b)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
132821906 (cul3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Stu2_CTS
RhgB_N
DUF6655
Motif
Other DBs
NCBI-GeneID:
132821906
NCBI-ProteinID:
XP_060690841
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Position
13:59144156..59206058
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AA seq
775 aa
AA seq
DB search
MXKKPSANMSNLGKAGTKKDTKMRIRAFPMTMDEKYVNSIWDLLKNAIQEIQRKNNSGLS
FEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQ
TAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARER
KGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVY
IKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKT
EDLACMYKLFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKGRFD
RFLQDSFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILD
KAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGM
FRDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFE
VFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQ
VSTFQMTILMLFNNREKYTFEEIQQETDIPERELIRALQSLACGKPTQRVLSKEPKSKEI
EPGHVFIVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKS
RKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtgaaagaaaccatccgccaacatgtcaaacctgggcaaagctgggacgaagaaagac
accaagatgaggatacgagcgtttcccatgactatggatgagaagtatgtaaatagtatc
tgggatttactaaagaatgccatccaagagattcagcgcaaaaataatagtgggctcagc
tttgaggaactctacagaaatgcatatacaatggtattacataaacatggtgagaaacta
tatactggactgagagaagttgtaactgaacatctgatcaataaggtacgggaagatgtg
ttaaactcattaaataataactttctacagaccttaaatcaagcatggaatgaccatcag
actgcaatggtgatgataagagacatactcatgtatatggatcgcgtgtatgtacaacag
aataacgtagaaaatgtttacaacttggggttgatcattttcagagatcaggtagtgcgc
tatggttgcattcgagaccacttacgccagactcttctggatatgattgcaagagagagg
aaaggagaggtagtagacagaggtgcaattcggaatgcctgtcagatgctaatgattctc
ggcttagaaggtcgatcagtatatgaggaagattttgaggctccgtttttagaaatgtct
gctgaatttttccagatggaaagtcagaagttcttagcagagaatagtgcatctgtatac
attaagaaagtggaagcacggattaatgaagaaattgaacgagtcatgcactgtcttgat
aaatccacagaagaaccaattgtgaaggtggtggaaagggaactaatttctaaacacatg
aagactattgtagaaatggaaaactctggcctagtccatatgttaaaaaatggaaaaaca
gaagacttagcatgcatgtacaagctcttcagtcgtgtgccaaatggtctgaaaaccatg
tgcgaatgtatgagttcctacctgagggaacagggcaaggcactagtttctgaggaaggc
gaaggcaagaatccagtggactacattcagggtctccttgatctgaaaggcagatttgat
cgtttccttcaggattcattcaacaatgatcgtctttttaaacagaccatagctggtgat
tttgaatactttcttaacctcaactccagatccccagagtatttgtcattatttatagat
gacaaacttaaaaaaggagtaaaaggcttgacagaacaagaagttgagacaatcttggac
aaggccatggtactgttccgatttatgcaagagaaagatgtgtttgagcgatactacaag
cagcatctggccagaaggcttctcactaacaaaagtgtatctgatgactcagagaaaaat
atgatctcgaaacttaagacggagtgtggctgccagttcacatctaaactggaaggaatg
ttcagggacatgagtatctcaaatacaacgatggatgagtttcgacaacacttacaaact
actggggtttctctaggaggtgtcgacctaactgtaagagttttgactacagggtattgg
cctactcagtctgctacaccaaaatgtaacatccccccggcaccgcgacatgcctttgaa
gtctttcgaagattctacttggcaaagcacagtggtcgacagctcacacttcaacaccac
atgggttcagcagatttaaatgccactttttatggacctgtgaaaaaggaagatggttct
gaggttggagtaggtggagctcaagtaactggctcgaataccagaaagcacatattacaa
gtatctactttccaaatgactatattaatgctgtttaacaatagagaaaaatacacattt
gaggaaattcagcaggaaacagatattcccgaacgagaattgatcagagcacttcagtca
ttagcatgtggaaaaccaacgcaacgagtccttagcaaagagcccaaatcaaaagaaatt
gagcctggtcacgtttttatagtgaatgatcagttcacatcaaagttgcacagagtcaag
attcaaacagttgctgccaaacaaggagagtctgacccagaacgaaaagaaacacgccag
aaagtagatgatgaccgaaagcatgaaattgaagctgcaattgtccgcatcatgaaatca
aggaagaagatgcagcataatgttctggtagcagaggtgactcagcaactgaaggctcgc
ttcttaccaagccccgtggtaattaaaaaaagaatcgagggacttattgagagagaatat
ttggcacgaacacctgaggatcgcaaagtatacacttatgtagcgtaa
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