Hemiscyllium ocellatum (epaulette shark): 132821913
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Entry
132821913 CDS
T09720
Symbol
copb2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132821913 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hoc04147
]
132821913 (copb2)
Membrane trafficking [BR:
hoc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
132821913 (copb2)
Exosome [BR:
hoc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
132821913 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
132821913
NCBI-ProteinID:
XP_060690852
LinkDB
All DBs
Position
13:complement(63098329..63133073)
Genome browser
AA seq
944 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHESQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWTCTQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIIKLG
REEPAMSMDASGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSMNGLAFYDWDTTELIRRIEIQPKHIFWSDSGELVCIA
TEDSFFVLKYLAEKVATAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKDLNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKSQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFTLAQECLHHAQDYGGLLLLATASGNAPMVNKLAEVVE
KDGKNNVAFVTYFMQGKLDNCLELLIKTGRLPEAAFFSRTYLPSQVSRVVKLWRENLAKI
NQKAAESLADPTEYENLFPGLKEAFVAEQYLKETTKTEERPAREYPLVTPNEERNVIEES
KDFTPSHHGPSVKTSEDEQEAVANVSTPVASVIADAKAILESDPAYVATKAGSGGIDIET
KKVFQLGQDTKTDSLTDLDDDLDNLELEDIDTSDVNLDEEFLDD
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgagacttgacatcaagcggaagctgaccgctcggtctgaccgagtgaaaagt
gttgacttgcacccaagtgaaccatggatgttagccagtctttacaatggcagtgtctgc
gtgtggaaccatgaatctcagactcttgtgaagacatttgaagtttgcgacttgcctgtg
agggcatccaaatttgtggcacgaaagaactgggtcatcacaggagcagatgatatgcaa
atcagagtcttcaactacaatacactggagagagttcacatgtttgaagctcattcagat
tacattcgttgtattgctgttcacccaactcaaccatacatcttgaccagcagtgatgac
atgcttattaaactgtgggattgggagaagaagtggacctgcacccaggtttttgaaggg
cacactcactatgttatgcaaattgtcatcaacccaaaagacaacaatcaatttgcaagt
gcatccttagataggaccattaaggtgtggcagcttgggtcatcctcacctaatttcacc
ttggaaggccatgaaaaaggagtgaactgcattgactactacagcggtggtgataagccc
tatctgatttctggagctgacgatcgcctagttaaaatctgggactaccagaataagact
tgtgttcagaccctggagggtcacgctcagaatgtctcttgtgttagcttccatcctgaa
cttccaattatcatcactggatcagaggatggtactgttcgtatctggcactcgagtact
taccgtttggagagtactctgaattatgggatggaacgagtctggtgcgtggcaagtctg
aggggctccaacaatgtggctcttggctatgatgaaggcagtatcatcattaagctggga
cgtgaagaacctgcaatgtctatggacgctagtggtaaaattatttgggccaagcattct
gaagtccagcaggctaacctcaaagcaatgggagatactgaaataaaagatggtgaaaga
ctgccactggctgtgaaggacatgggaagctgtgagatttacccacagacaattcaacat
aatcccaatggaaggtttgtggtagtctgtggtgatggtgaatacattatctacacagca
atggctttgagaaataagagctttggatctgcgcaggagtttgtatgggcacacgattct
tctgaatatgcaatcagggaaagcaacagtgtggtgaaaatattcaaaaacttcaaagaa
aagaaatcatttaagcctgattttggagcagaaggcatctatggagggttcctcctcggt
gtccgctcaatgaatggcttggcattttatgactgggataccaccgaactcatccgccga
attgaaatacagcccaaacatatattctggtcagactctggtgaactagtgtgcattgct
acagaggattccttctttgttttgaaatatcttgctgagaaggtggctacagcacaggaa
acacatgaaggagttacagaagatggcattgaagacgcttttgaggttcttggtgaaatt
caagaaattgttaagactggtttgtgggtaggagactgttttatctacaccagctctgtg
aacaggctgaactattatgttggtggagagattgtcacgattgcccaccttgacagaact
atgtacctcctgggttatatcccgaaagataatcgactgtatttgggagataaagatttg
aacatcgtcagctattctttgcttgtctctgttcttgagtaccagaccgcagtcatgagg
agagacttttccatggccgataaggttctgcccacaattccaaaggaacagaggacaaga
gtagcacacttccttgagaaacagggttttaaatcacaggctcttgcggtatccactgat
ccagagcaccgctttgagcttgcactgcaacttggagagctcaagattgcgtatcaattg
gctgtagaagcagagtcagagcagaaatggaagcagttggcagagcttgcgatcagtaag
tgccagtttacccttgctcaggagtgtttacaccatgcacaagattatggtggactattg
ctgctggctactgcctctggcaatgctccaatggttaacaagttagcagaagttgtcgaa
aaagatggcaagaacaatgttgcatttgtgacttacttcatgcaaggaaagcttgacaat
tgtttggaattgctgataaaaacaggacgtcttccagaagctgcctttttttccagaacc
tacttgccaagtcaggtctctagggttgtgaaactctggagagagaatcttgccaaaata
aaccaaaaagctgcagaatctcttgctgaccccacagagtatgaaaacctattcccaggc
ctaaaagaagcttttgtagctgagcagtatctgaaagaaaccaccaaaactgaagagagg
cccgccagggagtaccctcttgtcactccaaatgaagaaaggaatgttattgaagaatca
aaagactttacaccatctcatcatggaccatcagttaagacttctgaagatgagcaggaa
gcagtggcaaatgtgtctacaccagttgcgtcagtgatagcagatgcaaaagcaatatta
gaatcagaccctgcttatgtggcgactaaagctggctcaggaggaatagacattgaaact
aaaaaggtattccaacttgggcaagatacgaaaactgattctctgactgatcttgatgat
gatttggataacttggagttggaagacatagacacttcagacgttaacttggatgaagaa
ttcctggatgattaa
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