Hemiscyllium ocellatum (epaulette shark): 132822422
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Entry
132822422 CDS
T09720
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132822422 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hoc03036
]
132822422 (mbd4)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132822422 (mbd4)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
132822422 (mbd4)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132822422 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
AMIN
Clr2_transil
Motif
Other DBs
NCBI-GeneID:
132822422
NCBI-ProteinID:
XP_060691774
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All DBs
Position
14:complement(73038099..73070244)
Genome browser
AA seq
533 aa
AA seq
DB search
MEVSPSGVVNNNEHCFPNGTIKREYLKPEMANTENTQSLSETGPIIHALDNKITQDCNPE
LPEGWKRIVKERKTGKSAGKSDIYIVSPQGKLFRSSKELKNYFQRSTREENLKPEDISVF
WRGSTRGRITLDKQTSQLQATTPITQDFNTLTVDIPQTVLQDPDREEGCETEGGCSKRQR
QTKVKNASKQKPKKGAKLQNSNRQRLCSRRLSAKADQKELPPSEEKKLGDGTPLDGSQES
SKAKRKASSRKSKEQAADNKKQSRKEQAFESKGSPEVQVEEAEESVSEVSKFNRQMALSS
KEDSAADSAISGRSELCTSPSHCSESEIPSENTRRDTRESNGDSFTLLKTQVDNQPAPRV
KMDRRKTSPYFSRKYSEGASSPPRRKAFAKWIPPRSPFKLVQETLFHDPWKLLIATILLN
KTSGKKAIPVLWDFLERYPSAEVARVADWKEVAALLKPLGLYELRAKAITKFSDEYLTKQ
WRYPIELHGIGKYGNDSYRIFCVKEWKEVQPQDHKLNKYWEWLWANQESLGLS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggaagtatctccttctggtgtggtcaacaacaatgaacactgtttcccaaatggaact
atcaaaagagaatatcttaaacctgaaatggcaaacacagaaaacacacagtctttgtct
gaaactgggcctatcattcatgctttggataataaaataacccaagactgtaaccctgaa
cttcctgaaggatggaagagaatagtgaaagaaagaaaaactgggaagtcagcaggaaaa
tctgatatttacattgtaagccctcaggggaaactatttcgatcctcaaaggaacttaaa
aattactttcagagaagcaccagagaggaaaacctgaagcctgaagacattagtgttttc
tggcgaggctctactcggggaaggatcacccttgataaacagacaagtcagctacaggcc
accactcccataacacaagacttcaacacattgactgttgacattccacaaactgtgttg
caagatcctgacagagaggaaggatgtgaaaccgagggtggttgcagtaaaaggcagaga
cagacaaaggttaaaaatgcctcaaagcagaaacctaaaaaaggtgcaaaactgcaaaac
tctaacaggcagaggttgtgttcaagaaggttgtctgcaaaagcagaccagaaagaactt
cctccatctgaagaaaagaagctgggtgatgggactccacttgatggaagtcaagaaagt
tccaaagctaagaggaaagccagtagcagaaagtctaaagagcaagcagcagacaacaaa
aagcagtctcgaaaggagcaggcatttgaaagcaaaggatcaccagaagtacaagtggaa
gaagctgaagaatctgtttctgaagtatcaaagtttaacaggcagatggcactgtcaagc
aaggaggacagtgctgctgatagtgcgatctctggcagatctgaattatgcaccagccct
tcacattgttcagaatctgaaattccctctgaaaacactcgcagggacacaagggaatcc
aatggggacagttttacattgcttaaaacccaagtagacaatcaacctgctccaagagtg
aagatggatagaaggaagactagtccatacttttccaggaagtattccgaaggagcatcc
agcccaccacggcgtaaagcctttgccaagtggattcctcctcgatccccattcaaactg
gtccaggagactctctttcatgatccttggaaacttcttatcgcaaccatacttctgaat
aaaacttctggtaagaaggccattcctgtgttgtgggatttcctggaaagatacccttct
gcggaagttgcccgtgtagctgattggaaagaagtagctgcacttctgaagccacttggc
ttatacgagctgagagcaaaagctatcaccaagttttctgatgaatacctaaccaaacaa
tggagatatccgattgaactgcatggcattgggaagtacgggaatgattcctacaggatt
ttctgtgtcaaagaatggaaggaggtgcagcctcaagatcacaaactcaacaagtactgg
gaatggctttgggcaaatcaggagtcattgggcctgtcctaa
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