Hemiscyllium ocellatum (epaulette shark): 132822879
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Entry
132822879 CDS
T09720
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D isoform X1
KO
K15181
negative elongation factor C/D
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132822879 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132822879 (nelfcd)
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
132822879 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
132822879
NCBI-ProteinID:
XP_060692244
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All DBs
Position
15:complement(9120413..9167071)
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AA seq
580 aa
AA seq
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MSEEYFGSAADWEEQDGSMHDEDEGDGEDDAEVQQECLQKFSSRDYIMEPPIFNTLKRYF
QAGGSPEHVIQMLSENYTAVAQTVNLLAEWLIQTGVEPSHVQETVENHLKNLLIKHFDPR
KADSIFTEEGETPAWLEQMIAHVTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITS
VSTACQQLEVFSRVLRTSLATLIDGGEEHLEKNLPEFAKMVCHGEHTYLYAQSIMSVLAQ
EEQGGAAVRRIAQEVQRYAHEKGHDASQITLALGTAASYPRACQALGAMLSKGALNPADI
TVLYKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGSKINPEHKHKYIYILAYAASVVESW
KKNKRFNINKDELKSTSKAIETVHNLCCNENKGASELVAELGTLYQCIRFPVVAMGVLKW
VDWTVSEPSYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVMEQL
ELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTSDFV
HLFLPILENDSIVGTIKTEGECDAVAEFIAHCKSNFIMMN
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggagtatttcggcagtgctgcggactgggaggagcaggatggctccatgcac
gatgaggatgagggggatggtgaagatgatgcagaggtgcagcaggagtgcctgcaaaaa
ttttccagccgagactacataatggagccacctatattcaacacactgaaaaggtatttc
caggcagggggctctccagaacatgtgatccagatgctttctgagaattatacagcagta
gcacagactgtaaacctgttggcagagtggctgattcagacaggggttgagccatcacat
gttcaggagactgttgaaaatcatttgaaaaatttgctgatcaaacactttgaccctcgg
aaagctgattccatattcacagaggagggagagaccccagcctggttagagcagatgatt
gctcatgtgacttggagagacctcttctataaactagctgaagctcaccctgactgtttg
atgctgaactttactgttaagctgatctcagatgctggataccagggtgaaataaccagt
gtgtcaacagcctgtcagcagttggaagttttttcccgtgttctccgcacctcgcttgcc
acgctcattgacggaggtgaagaacatctggagaaaaacctgcctgagtttgcaaaaatg
gtgtgtcatggagagcacacatacctttatgctcagtccataatgtctgtcctggcccag
gaggaacaaggtggagcagctgtacgtcgaattgcgcaggaagttcagagatatgcgcat
gagaaaggtcatgatgccagccagatcaccttggcattgggcactgctgcatcctacccc
cgagcctgccaggcactgggtgccatgttatccaagggagctctgaatcctgctgacatc
actgtgttatacaaaatgttcacgagtatggatccacctcctgtggaattgatcagagtc
cctgcattcctcgatcttttcatgcaatccctcttcaaaccaggctctaaaatcaaccct
gagcataaacacaaatacatctacatcctggcctatgcagccagtgtggtggagtcatgg
aaaaagaacaaaagatttaatatcaacaaagatgagctgaaatcaacatcaaaggccatc
gaaaccgttcacaatttgtgctgcaatgaaaacaaaggggcttcagagttagttgcagag
ctggggaccctctatcaatgtattcggttcccagtggtagcaatgggagtgctgaaatgg
gttgactggacagtatcagagcccagctattttcagttgcagactgaccatacacctgtt
cacctcgcactactggatgagatcagtacctgccaccaactcctccatccccaagtgctg
cagctccttgtgaaactgtttgagactgaacattcccagcttgatgtcatggaacagctg
gagttgaagaagaccctgctggacaggatggtccacttgttgagtcgcggttatgtccta
cctgtagtcagctacatccgcaaatgtttagagaaactggacacagatatctcactcatc
agatattttgtcacagaggtactggatgtcattgctcctccatacacgtcagactttgtc
cacctttttctcccaatcttggagaatgatagcattgttggcacaataaaaacagaaggg
gagtgtgatgctgtggcagagtttatcgcacactgcaaatccaatttcatcatgatgaac
tag
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