Hemiscyllium ocellatum (epaulette shark): 132823003
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Entry
132823003 CDS
T09720
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hoc03041
]
132823003 (rbm39a)
Spliceosome [BR:
hoc03041
]
Common components
Common spliceosomal components
General mRNP proteins
132823003 (rbm39a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RRM_5
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
132823003
NCBI-ProteinID:
XP_060692510
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All DBs
Position
15:59818134..59863891
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AA seq
555 aa
AA seq
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MADDLDIEAMLEAPYRKEDENKSSKANGQEERSKKKKKSRSRSHSRERKRSRSKERRRSK
ERDRRRSRSRERKSSKSREHRRSRSKDRRRVERGRYRSPLAKIYESKLNCSGQHPQYIST
DLRQSSGPKFSSGSSSRGKIGMQPGIKISRRRSRSRSPHKKDKSPIREPIDNISPEERDA
RTVFCMQLAARIRPRDLEEFFSSVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIG
LTGQKLLGVPIIVQASQAEKNRAAALANNLQKGTAGPMRLYVGSLHFNITEEMLRGIFEP
FGRIENIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFELAGRPMKVGHVTERSDS
SNASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGNISLGAMAA
VTDLQARIIQQTEALNPPVTVNTPPIATQCFQLSNMFNPQSEDDPAWDQEIRDDVIEECN
KHGGVIHIFVDKNSPQGNVYVKCPTIAAAAAAVGALHGRWFAGKMITAAYVPLPTYHNLF
PDSLTTTQLLTPARR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgatttggatattgaagcaatgctcgaggcaccatacaggaaggaggatgag
aacaaatcgagcaaagccaatggacaagaggagcgcagtaaaaagaaaaagaagagccga
agtcgcagtcacagtcgtgaaaggaaaagaagcagaagcaaagagcgcaggcgcagcaaa
gagcgagacaggcggagaagcaggagcagggagagaaagagcagcaagagtagagaacat
cgtcgcagccgaagcaaggaccgccggagagtagagagaggccgctatcggagcccattg
gccaaaatatatgaatcaaaacttaactgtagtgggcaacatccacaatacatttcaacg
gatctcaggcagagttctggtccaaaattcagcagtggtagcagcagcagagggaagatt
ggcatgcaacccggtatcaaaataagtcgaaggcgctcaagaagcagaagcccacataaa
aaggataaaagtccaataagggagccaatcgataatatttctcctgaagaaagagatgcc
cgaactgtgttctgtatgcaacttgcagcacgaattcgaccgagagacttggaagaattc
ttttcatctgtgggaaaggttcgagacgtcagaatgatatcagataggaactcaaggcgt
tcaaaaggaattgcttatgtggaatttgttgatgtgagctcagttccactcgccatcggc
ttgactgggcagaagctgcttggtgtgccaattattgttcaggcttcacaggctgagaag
aaccgagcagcagctcttgctaacaacctacagaaaggcacagcaggaccaatgaggcta
tatgtaggatcgttacacttcaatattactgaggaaatgttgagaggaatttttgagccc
tttgggagaattgaaaatatccaactgatgatggatagtgaaaccgggcggtcaaaaggt
tatggattcataacattttctgatgctgagtgtgcaaagaaggctttggaacagttgaat
ggctttgaacttgctggtagaccaatgaaggttggtcatgttacagagcgatcagattca
tccaatgcaagctcgttcttggacagcgatgaactggagaggactggcattgaccttgga
acgacaggacgcctacagttgatggctaggcttgcagaaggaacagggttgcaaattccc
ccagcagcacagcaagcattgcagatgagtggcaatatttcattgggtgccatggcagca
gtaacggacttgcaagcaagaattatccaacagactgaagcactgaatcctcctgtgact
gtaaataccccaccaatagcgacgcagtgttttcagctctccaacatgtttaacccacag
tcggaagatgatccagcctgggaccaagaaattcgcgatgatgtgattgaagaatgtaat
aaacatggaggtgtaattcacatatttgtggacaaaaattcgccccagggaaatgtctat
gtgaaatgtccgactattgctgctgcagctgctgctgttggtgccttgcatggaaggtgg
tttgctggaaaaatgatcacggctgcatatgtgccacttccaacttaccacaatctcttc
ccagattcattgacaactacccagctgttgactccagcaagacgatag
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