Hemiscyllium ocellatum (epaulette shark): 132823071
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Entry
132823071 CDS
T09720
Name
(RefSeq) collagen alpha-1(XXIII) chain-like
KO
K24355
collagen type XXIII alpha
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hoc00536
]
132823071
Glycosaminoglycan binding proteins [BR:
hoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132823071
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Gene cluster
GFIT
Motif
Pfam:
Collagen
FliT
DUF4446
Vma12
Motif
Other DBs
NCBI-GeneID:
132823071
NCBI-ProteinID:
XP_060692595
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All DBs
Position
16:46728576..46970290
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AA seq
404 aa
AA seq
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MVKNDQPPKAGKIETTMLTSKPINCLRTLPTVVSLLLSVVSVVFCLFLNVKTARLQDRVK
LLENQKGSFSLQAVREILWDDANLLPLLQKRIDELQEELTDGVAKIRTVREATSECLCPP
GPPGKRGKPGRRGVNGISGPPGRDGYPGPLGLDGKPGQPGPKGEKGSQGNPGPPGLAGPV
GPIGPRGDPGKEGAQGPPGATGEKGIAGPPGLRGLMGLKGEPGEKGEKGRSGLDGQKGEP
GTTEIIDYDGKIQQALQGIIGPKGESGIPGVPGIPGQKGEKGDIGSSGPPGEPGLNGNKG
EKGDGNRKGDRGFPGIQGNPGSMGPAGLPGQKGEKGKPGESGLDGFPGLRGLKGDRGEKG
VKGERSYPGKKGSKGQKGEQGPPGLDQPCPVGPDGLPIPGCWHK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagaatgatcagccacctaaagctgggaaaattgaaacaacgatgctaacatca
aaacctataaattgtttaaggacactgccaacagtagtcagtttattgctatcagtcgtt
tctgttgtgttttgcctgtttctcaatgttaaaactgcgagattgcaagatagagtaaag
ttgttggaaaatcaaaaaggaagcttttcgttgcaagcagtgcgggagattttatgggac
gatgcaaatttactgcccttactacagaaaagaatcgacgaacttcaagaggaattgact
gatggagttgcaaaaattagaacagttagagaagctacatctgaatgtctctgtccacct
ggcccaccaggaaaacgtggcaaaccaggaagaagaggagtcaatggaatctccgggcct
ccaggaagagatggttatccgggcccacttggattggatggaaagccaggccaacctgga
ccaaaaggagaaaagggtagtcaaggcaatcctggaccaccaggtcttgctggtcctgta
ggtccaatcggaccccgaggagacccagggaaagaaggtgcccaaggacctccaggtgca
actggagaaaaaggcattgcaggtcctccgggattacgagggttaatgggattaaagggt
gaacctggcgagaaaggtgaaaagggacgctcaggattggatggtcaaaaaggtgaacca
ggaacaacagagataatagactacgatggaaaaattcaacaggctctacagggtataatt
gggcctaaaggagaatcgggaatcccaggagtcccaggaattccaggacagaaaggtgaa
aaaggagacattgggtcctctggcccacctggtgaaccaggattgaatggtaataaaggt
gaaaagggcgatggcaatagaaaaggtgatagaggttttcctggcatacagggaaatcct
ggttccatgggtcctgcaggtctacccggtcaaaaaggagaaaagggaaaacctggtgaa
tcgggattagatggtttcccaggactgagggggctgaagggagacagaggtgaaaaagga
gtcaagggtgagagaagttatccaggtaaaaaaggaagcaaggggcaaaagggagaacaa
ggaccccctgggttagatcagccgtgtccagtgggcccagatggcctgccgattccagga
tgttggcataagtga
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