Hemiscyllium ocellatum (epaulette shark): 132823146
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Entry
132823146 CDS
T09720
Symbol
lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132823146 (lsm11)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
132823146 (lsm11)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
132823146
NCBI-ProteinID:
XP_060692696
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All DBs
Position
16:11062136..11082849
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AA seq
331 aa
AA seq
DB search
MAEAGTGSSEPDPDEDGDGRLNVSSPRFDPYLALYSSPPPPLPFPNVRTFNNIAEYQSFL
RRRPREREPGDPAQAQARARGRRRTAARPPPDPDRIERLKKLMVAEQGSEERPRPLRRER
APKNVLTRMSLHEGSPLGELYRCVQDRIKVNVHIRTFKGLRGVCSGFLVTFDKFWNMALV
DVDETFRKPILGKAFYSEPVLTVGRLFNRLKLQERSADEEPGATSTEQTGYLPKRFQGTN
AEQDDSKNLTCGLTQVSSDTLNPSAQSEGGDLDRSKGDTKQPSLKLRTLTGGKQKWKKKS
LPRVDYQQVSQRHVNQLFIRGENVLLISFVQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggccgggaccgggagctcggagcccgacccggacgaagacggggacgggcgg
ctgaatgtcagctcgccgcgtttcgacccgtacctggcgctgtacagcagcccgccgccg
ccgctgcctttccccaacgtgcgcaccttcaacaacatcgccgagtaccagagcttcctg
aggcggcggccgcgggaacgtgagcccggggacccggcccaggcccaggcccgggctcgc
gggcgccgccgcaccgccgccaggcctcccccggaccccgacaggatcgagcgcctcaag
aagctgatggtggccgagcagggcagcgaggagaggcccaggcccctcaggagggagcgg
gccccgaagaatgtgctgacccggatgtccctacatgaaggcagcccactgggtgaattg
tatcgttgcgttcaggacaggataaaggtcaatgtccacattcggactttcaaaggactg
cggggcgtctgttcaggatttttggtgaccttcgacaagttctggaacatggcactcgtg
gatgtggatgagaccttcaggaaacctatccttgggaaagccttttacagtgaaccagta
ttaaccgttggcagactttttaatcggctgaaactacaagaaagatctgcagatgaggag
ccaggtgccacatcgacagaacaaacaggctatttacccaaaaggtttcagggtactaat
gctgaacaggatgacagcaaaaatctgacttgtggacttacacaggtatcctcagatact
ttaaacccctctgcacagagtgaaggaggagaccttgaccgatcaaagggagacaccaaa
caaccaagcttgaagctcaggacactgacaggaggaaaacagaaatggaaaaagaaatcc
ttacccagggtggattatcagcaggtttctcaaagacatgtgaatcaacttttcattcgg
ggagagaatgtcttactaatcagttttgtgcaatga
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